Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC22.41■■□□□ 1.18
DCLRE1AQ6PJP8 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC22.41■■□□□ 1.18
DCLRE1AQ6PJP8 AC091799.1-201ENST00000422823 811 ntBASIC22.41■■□□□ 1.18
DCLRE1AQ6PJP8 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
DCLRE1AQ6PJP8 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC22.41■■□□□ 1.18
DCLRE1AQ6PJP8 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC22.41■■□□□ 1.18
DCLRE1AQ6PJP8 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC22.41■■□□□ 1.18
DCLRE1AQ6PJP8 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
DCLRE1AQ6PJP8 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
DCLRE1AQ6PJP8 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
DCLRE1AQ6PJP8 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
DCLRE1AQ6PJP8 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
DCLRE1AQ6PJP8 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
DCLRE1AQ6PJP8 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
DCLRE1AQ6PJP8 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC22.4■■□□□ 1.18
DCLRE1AQ6PJP8 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
DCLRE1AQ6PJP8 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
DCLRE1AQ6PJP8 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
DCLRE1AQ6PJP8 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
DCLRE1AQ6PJP8 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC22.4■■□□□ 1.18
DCLRE1AQ6PJP8 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
DCLRE1AQ6PJP8 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC22.4■■□□□ 1.18
DCLRE1AQ6PJP8 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC22.4■■□□□ 1.18
DCLRE1AQ6PJP8 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
DCLRE1AQ6PJP8 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
DCLRE1AQ6PJP8 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
DCLRE1AQ6PJP8 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
DCLRE1AQ6PJP8 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
DCLRE1AQ6PJP8 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
DCLRE1AQ6PJP8 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
DCLRE1AQ6PJP8 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC22.39■■□□□ 1.18
DCLRE1AQ6PJP8 PPP1R14BP2-201ENST00000426284 444 ntBASIC22.39■■□□□ 1.17
DCLRE1AQ6PJP8 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC22.39■■□□□ 1.17
DCLRE1AQ6PJP8 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC22.39■■□□□ 1.17
DCLRE1AQ6PJP8 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC22.39■■□□□ 1.17
DCLRE1AQ6PJP8 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
DCLRE1AQ6PJP8 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC22.39■■□□□ 1.17
DCLRE1AQ6PJP8 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
DCLRE1AQ6PJP8 AC010980.2-201ENST00000587099 1412 ntBASIC22.39■■□□□ 1.17
DCLRE1AQ6PJP8 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
DCLRE1AQ6PJP8 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC22.38■■□□□ 1.17
DCLRE1AQ6PJP8 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC22.38■■□□□ 1.17
DCLRE1AQ6PJP8 CLDN5-201ENST00000403084 2357 ntBASIC22.38■■□□□ 1.17
DCLRE1AQ6PJP8 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC22.38■■□□□ 1.17
DCLRE1AQ6PJP8 BX276092.2-201ENST00000417668 665 ntBASIC22.38■■□□□ 1.17
DCLRE1AQ6PJP8 AC098934.4-201ENST00000564127 592 ntBASIC22.38■■□□□ 1.17
DCLRE1AQ6PJP8 AC092118.2-201ENST00000613495 667 ntBASIC22.38■■□□□ 1.17
DCLRE1AQ6PJP8 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
DCLRE1AQ6PJP8 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
DCLRE1AQ6PJP8 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
DCLRE1AQ6PJP8 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
DCLRE1AQ6PJP8 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
DCLRE1AQ6PJP8 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC22.38■■□□□ 1.17
DCLRE1AQ6PJP8 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC22.38■■□□□ 1.17
DCLRE1AQ6PJP8 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
DCLRE1AQ6PJP8 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
DCLRE1AQ6PJP8 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
DCLRE1AQ6PJP8 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
DCLRE1AQ6PJP8 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
DCLRE1AQ6PJP8 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
DCLRE1AQ6PJP8 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC22.37■■□□□ 1.17
DCLRE1AQ6PJP8 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
DCLRE1AQ6PJP8 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
DCLRE1AQ6PJP8 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC22.37■■□□□ 1.17
DCLRE1AQ6PJP8 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
DCLRE1AQ6PJP8 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC22.36■■□□□ 1.17
DCLRE1AQ6PJP8 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
DCLRE1AQ6PJP8 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
DCLRE1AQ6PJP8 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
DCLRE1AQ6PJP8 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
DCLRE1AQ6PJP8 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
DCLRE1AQ6PJP8 CDV3P1-201ENST00000471403 739 ntBASIC22.36■■□□□ 1.17
DCLRE1AQ6PJP8 CASP6-205ENST00000505486 538 ntTSL 4 BASIC22.36■■□□□ 1.17
DCLRE1AQ6PJP8 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
DCLRE1AQ6PJP8 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
DCLRE1AQ6PJP8 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
DCLRE1AQ6PJP8 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC22.36■■□□□ 1.17
DCLRE1AQ6PJP8 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
DCLRE1AQ6PJP8 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
DCLRE1AQ6PJP8 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
DCLRE1AQ6PJP8 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
DCLRE1AQ6PJP8 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
DCLRE1AQ6PJP8 GOLGA2P6-201ENST00000340929 2049 ntBASIC22.35■■□□□ 1.17
DCLRE1AQ6PJP8 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
DCLRE1AQ6PJP8 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
DCLRE1AQ6PJP8 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
DCLRE1AQ6PJP8 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
DCLRE1AQ6PJP8 FAM201B-201ENST00000458407 597 ntBASIC22.35■■□□□ 1.17
DCLRE1AQ6PJP8 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
DCLRE1AQ6PJP8 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
DCLRE1AQ6PJP8 FAM21FP-204ENST00000608637 956 ntBASIC22.35■■□□□ 1.17
DCLRE1AQ6PJP8 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC22.35■■□□□ 1.17
DCLRE1AQ6PJP8 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
DCLRE1AQ6PJP8 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
DCLRE1AQ6PJP8 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
DCLRE1AQ6PJP8 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
DCLRE1AQ6PJP8 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
DCLRE1AQ6PJP8 LSR-203ENST00000360798 1963 ntTSL 2 BASIC22.34■■□□□ 1.17
DCLRE1AQ6PJP8 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC22.34■■□□□ 1.17
DCLRE1AQ6PJP8 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms