Protein–RNA interactions for Protein: Q6NT76

HMBOX1, Homeobox-containing protein 1, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1Q6NT76 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HMBOX1Q6NT76 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HMBOX1Q6NT76 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HMBOX1Q6NT76 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
HMBOX1Q6NT76 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.72■□□□□ 0.75
HMBOX1Q6NT76 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
HMBOX1Q6NT76 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HMBOX1Q6NT76 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.72■□□□□ 0.75
HMBOX1Q6NT76 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HMBOX1Q6NT76 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.72■□□□□ 0.75
HMBOX1Q6NT76 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMBOX1Q6NT76 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMBOX1Q6NT76 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HMBOX1Q6NT76 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HMBOX1Q6NT76 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMBOX1Q6NT76 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.71■□□□□ 0.75
HMBOX1Q6NT76 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.71■□□□□ 0.75
HMBOX1Q6NT76 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
HMBOX1Q6NT76 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMBOX1Q6NT76 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
HMBOX1Q6NT76 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMBOX1Q6NT76 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.71■□□□□ 0.75
HMBOX1Q6NT76 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HMBOX1Q6NT76 AC099791.2-201ENST00000605725 427 ntBASIC19.71■□□□□ 0.75
HMBOX1Q6NT76 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMBOX1Q6NT76 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
HMBOX1Q6NT76 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMBOX1Q6NT76 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMBOX1Q6NT76 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMBOX1Q6NT76 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMBOX1Q6NT76 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMBOX1Q6NT76 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMBOX1Q6NT76 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMBOX1Q6NT76 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMBOX1Q6NT76 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
HMBOX1Q6NT76 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMBOX1Q6NT76 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
HMBOX1Q6NT76 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HMBOX1Q6NT76 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HMBOX1Q6NT76 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HMBOX1Q6NT76 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.7■□□□□ 0.74
HMBOX1Q6NT76 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HMBOX1Q6NT76 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
HMBOX1Q6NT76 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HMBOX1Q6NT76 AC087289.5-201ENST00000586076 3175 ntBASIC19.7■□□□□ 0.74
HMBOX1Q6NT76 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
HMBOX1Q6NT76 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HMBOX1Q6NT76 AC110285.6-201ENST00000617652 491 ntBASIC19.7■□□□□ 0.74
HMBOX1Q6NT76 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.7■□□□□ 0.74
HMBOX1Q6NT76 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.7■□□□□ 0.74
HMBOX1Q6NT76 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.7■□□□□ 0.74
HMBOX1Q6NT76 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HMBOX1Q6NT76 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
HMBOX1Q6NT76 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HMBOX1Q6NT76 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
HMBOX1Q6NT76 AC003102.1-202ENST00000563394 1796 ntBASIC19.7■□□□□ 0.74
HMBOX1Q6NT76 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HMBOX1Q6NT76 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HMBOX1Q6NT76 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HMBOX1Q6NT76 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
HMBOX1Q6NT76 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HMBOX1Q6NT76 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HMBOX1Q6NT76 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HMBOX1Q6NT76 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HMBOX1Q6NT76 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.69■□□□□ 0.74
HMBOX1Q6NT76 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.69■□□□□ 0.74
HMBOX1Q6NT76 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
HMBOX1Q6NT76 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.69■□□□□ 0.74
HMBOX1Q6NT76 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.69■□□□□ 0.74
HMBOX1Q6NT76 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
HMBOX1Q6NT76 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HMBOX1Q6NT76 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HMBOX1Q6NT76 AC112907.3-201ENST00000577781 2400 ntBASIC19.68■□□□□ 0.74
HMBOX1Q6NT76 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
HMBOX1Q6NT76 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
HMBOX1Q6NT76 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
HMBOX1Q6NT76 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HMBOX1Q6NT76 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HMBOX1Q6NT76 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.68■□□□□ 0.74
HMBOX1Q6NT76 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.68■□□□□ 0.74
HMBOX1Q6NT76 DUX4L19-201ENST00000557448 1267 ntBASIC19.68■□□□□ 0.74
HMBOX1Q6NT76 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
HMBOX1Q6NT76 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HMBOX1Q6NT76 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HMBOX1Q6NT76 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HMBOX1Q6NT76 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HMBOX1Q6NT76 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.68■□□□□ 0.74
HMBOX1Q6NT76 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.68■□□□□ 0.74
HMBOX1Q6NT76 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.68■□□□□ 0.74
HMBOX1Q6NT76 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HMBOX1Q6NT76 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HMBOX1Q6NT76 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HMBOX1Q6NT76 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HMBOX1Q6NT76 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
HMBOX1Q6NT76 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HMBOX1Q6NT76 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
HMBOX1Q6NT76 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HMBOX1Q6NT76 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HMBOX1Q6NT76 AC096631.2-201ENST00000436136 790 ntBASIC19.67■□□□□ 0.74
HMBOX1Q6NT76 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms