Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.12■□□□□ 0.97
KHDC1Q4VXA5 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
KHDC1Q4VXA5 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
KHDC1Q4VXA5 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
KHDC1Q4VXA5 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
KHDC1Q4VXA5 AL391422.3-201ENST00000603791 2761 ntBASIC21.11■□□□□ 0.97
KHDC1Q4VXA5 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
KHDC1Q4VXA5 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
KHDC1Q4VXA5 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
KHDC1Q4VXA5 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
KHDC1Q4VXA5 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.11■□□□□ 0.97
KHDC1Q4VXA5 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.11■□□□□ 0.97
KHDC1Q4VXA5 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
KHDC1Q4VXA5 AC079140.4-201ENST00000507448 529 ntBASIC21.11■□□□□ 0.97
KHDC1Q4VXA5 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.11■□□□□ 0.97
KHDC1Q4VXA5 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
KHDC1Q4VXA5 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
KHDC1Q4VXA5 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
KHDC1Q4VXA5 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
KHDC1Q4VXA5 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KHDC1Q4VXA5 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
KHDC1Q4VXA5 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.1■□□□□ 0.97
KHDC1Q4VXA5 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KHDC1Q4VXA5 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.1■□□□□ 0.97
KHDC1Q4VXA5 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.1■□□□□ 0.97
KHDC1Q4VXA5 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.1■□□□□ 0.97
KHDC1Q4VXA5 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.1■□□□□ 0.97
KHDC1Q4VXA5 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.1■□□□□ 0.97
KHDC1Q4VXA5 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KHDC1Q4VXA5 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.1■□□□□ 0.97
KHDC1Q4VXA5 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KHDC1Q4VXA5 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
KHDC1Q4VXA5 AC004854.2-201ENST00000608450 1441 ntBASIC21.1■□□□□ 0.97
KHDC1Q4VXA5 AC003102.1-202ENST00000563394 1796 ntBASIC21.1■□□□□ 0.97
KHDC1Q4VXA5 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KHDC1Q4VXA5 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
KHDC1Q4VXA5 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
KHDC1Q4VXA5 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
KHDC1Q4VXA5 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.09■□□□□ 0.97
KHDC1Q4VXA5 AP004607.4-201ENST00000530158 1459 ntBASIC21.09■□□□□ 0.97
KHDC1Q4VXA5 AC007952.6-201ENST00000573168 2673 ntBASIC21.09■□□□□ 0.97
KHDC1Q4VXA5 AC003957.1-201ENST00000625108 2673 ntBASIC21.09■□□□□ 0.97
KHDC1Q4VXA5 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
KHDC1Q4VXA5 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.09■□□□□ 0.97
KHDC1Q4VXA5 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
KHDC1Q4VXA5 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.09■□□□□ 0.97
KHDC1Q4VXA5 NTF6G-201ENST00000591094 616 ntBASIC21.09■□□□□ 0.97
KHDC1Q4VXA5 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
KHDC1Q4VXA5 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
KHDC1Q4VXA5 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
KHDC1Q4VXA5 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.09■□□□□ 0.97
KHDC1Q4VXA5 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
KHDC1Q4VXA5 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
KHDC1Q4VXA5 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
KHDC1Q4VXA5 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
KHDC1Q4VXA5 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
KHDC1Q4VXA5 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
KHDC1Q4VXA5 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.08■□□□□ 0.97
KHDC1Q4VXA5 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
KHDC1Q4VXA5 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
KHDC1Q4VXA5 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.08■□□□□ 0.97
KHDC1Q4VXA5 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
KHDC1Q4VXA5 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.08■□□□□ 0.96
KHDC1Q4VXA5 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.08■□□□□ 0.96
KHDC1Q4VXA5 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.96
KHDC1Q4VXA5 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.07■□□□□ 0.96
KHDC1Q4VXA5 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
KHDC1Q4VXA5 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
KHDC1Q4VXA5 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.07■□□□□ 0.96
KHDC1Q4VXA5 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
KHDC1Q4VXA5 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
KHDC1Q4VXA5 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.07■□□□□ 0.96
KHDC1Q4VXA5 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
KHDC1Q4VXA5 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.07■□□□□ 0.96
KHDC1Q4VXA5 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.07■□□□□ 0.96
KHDC1Q4VXA5 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.07■□□□□ 0.96
KHDC1Q4VXA5 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
KHDC1Q4VXA5 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.07■□□□□ 0.96
KHDC1Q4VXA5 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
KHDC1Q4VXA5 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
KHDC1Q4VXA5 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
KHDC1Q4VXA5 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
KHDC1Q4VXA5 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
KHDC1Q4VXA5 AC244015.2-201ENST00000616358 1861 ntBASIC21.07■□□□□ 0.96
KHDC1Q4VXA5 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
KHDC1Q4VXA5 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
KHDC1Q4VXA5 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
KHDC1Q4VXA5 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
KHDC1Q4VXA5 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
KHDC1Q4VXA5 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
KHDC1Q4VXA5 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
KHDC1Q4VXA5 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.06■□□□□ 0.96
KHDC1Q4VXA5 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
KHDC1Q4VXA5 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.06■□□□□ 0.96
KHDC1Q4VXA5 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.06■□□□□ 0.96
KHDC1Q4VXA5 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.06■□□□□ 0.96
KHDC1Q4VXA5 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
KHDC1Q4VXA5 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
KHDC1Q4VXA5 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
KHDC1Q4VXA5 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms