Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
USH1GQ495M9 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
USH1GQ495M9 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
USH1GQ495M9 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
USH1GQ495M9 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
USH1GQ495M9 GOLGA2P6-201ENST00000340929 2049 ntBASIC24.05■■□□□ 1.44
USH1GQ495M9 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC24.05■■□□□ 1.44
USH1GQ495M9 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
USH1GQ495M9 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
USH1GQ495M9 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
USH1GQ495M9 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
USH1GQ495M9 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC24.05■■□□□ 1.44
USH1GQ495M9 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
USH1GQ495M9 AC069236.1-201ENST00000604339 616 ntBASIC24.05■■□□□ 1.44
USH1GQ495M9 AL591742.1-201ENST00000604433 565 ntBASIC24.05■■□□□ 1.44
USH1GQ495M9 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC24.05■■□□□ 1.44
USH1GQ495M9 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
USH1GQ495M9 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC24.05■■□□□ 1.44
USH1GQ495M9 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC24.05■■□□□ 1.44
USH1GQ495M9 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC24.05■■□□□ 1.44
USH1GQ495M9 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
USH1GQ495M9 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
USH1GQ495M9 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC24.05■■□□□ 1.44
USH1GQ495M9 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
USH1GQ495M9 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
USH1GQ495M9 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
USH1GQ495M9 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC24.04■■□□□ 1.44
USH1GQ495M9 AC245052.3-201ENST00000450182 901 ntBASIC24.04■■□□□ 1.44
USH1GQ495M9 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
USH1GQ495M9 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC24.04■■□□□ 1.44
USH1GQ495M9 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC24.04■■□□□ 1.44
USH1GQ495M9 MKRN4P-201ENST00000444706 1521 ntBASIC24.04■■□□□ 1.44
USH1GQ495M9 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
USH1GQ495M9 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC24.04■■□□□ 1.44
USH1GQ495M9 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC24.03■■□□□ 1.44
USH1GQ495M9 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC24.03■■□□□ 1.44
USH1GQ495M9 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC24.03■■□□□ 1.44
USH1GQ495M9 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
USH1GQ495M9 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
USH1GQ495M9 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
USH1GQ495M9 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
USH1GQ495M9 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC24.03■■□□□ 1.44
USH1GQ495M9 AC098934.4-201ENST00000564127 592 ntBASIC24.03■■□□□ 1.44
USH1GQ495M9 OR10C1-204ENST00000622521 1039 ntBASIC24.03■■□□□ 1.44
USH1GQ495M9 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
USH1GQ495M9 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
USH1GQ495M9 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
USH1GQ495M9 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC24.02■■□□□ 1.44
USH1GQ495M9 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
USH1GQ495M9 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
USH1GQ495M9 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
USH1GQ495M9 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
USH1GQ495M9 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC24.02■■□□□ 1.44
USH1GQ495M9 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC24.02■■□□□ 1.44
USH1GQ495M9 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC24.02■■□□□ 1.44
USH1GQ495M9 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC24.02■■□□□ 1.44
USH1GQ495M9 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
USH1GQ495M9 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
USH1GQ495M9 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC24.02■■□□□ 1.44
USH1GQ495M9 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC24.02■■□□□ 1.44
USH1GQ495M9 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.43
USH1GQ495M9 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
USH1GQ495M9 MFF-203ENST00000349901 1716 ntTSL 2 BASIC24.01■■□□□ 1.43
USH1GQ495M9 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
USH1GQ495M9 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC24.01■■□□□ 1.43
USH1GQ495M9 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC24.01■■□□□ 1.43
USH1GQ495M9 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
USH1GQ495M9 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC24.01■■□□□ 1.43
USH1GQ495M9 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC24.01■■□□□ 1.43
USH1GQ495M9 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
USH1GQ495M9 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
USH1GQ495M9 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC24■■□□□ 1.43
USH1GQ495M9 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC24■■□□□ 1.43
USH1GQ495M9 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC24■■□□□ 1.43
USH1GQ495M9 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
USH1GQ495M9 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
USH1GQ495M9 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
USH1GQ495M9 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC24■■□□□ 1.43
USH1GQ495M9 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
USH1GQ495M9 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
USH1GQ495M9 AC091799.1-201ENST00000422823 811 ntBASIC24■■□□□ 1.43
USH1GQ495M9 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC24■■□□□ 1.43
USH1GQ495M9 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC24■■□□□ 1.43
USH1GQ495M9 MARS-234ENST00000630571 216 ntTSL 5 BASIC24■■□□□ 1.43
USH1GQ495M9 MARS-235ENST00000630803 183 ntTSL 3 BASIC24■■□□□ 1.43
USH1GQ495M9 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
USH1GQ495M9 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
USH1GQ495M9 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
USH1GQ495M9 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
USH1GQ495M9 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
USH1GQ495M9 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC23.99■■□□□ 1.43
USH1GQ495M9 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
USH1GQ495M9 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
USH1GQ495M9 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
USH1GQ495M9 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
USH1GQ495M9 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
USH1GQ495M9 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC23.99■■□□□ 1.43
USH1GQ495M9 CD44-222ENST00000526025 1052 ntTSL 2 BASIC23.99■■□□□ 1.43
USH1GQ495M9 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC23.99■■□□□ 1.43
USH1GQ495M9 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms