Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PDS5AQ29RF7 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
PDS5AQ29RF7 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
PDS5AQ29RF7 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC25.23■■□□□ 1.63
PDS5AQ29RF7 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
PDS5AQ29RF7 ABHD17AP1-201ENST00000358206 933 ntBASIC25.23■■□□□ 1.63
PDS5AQ29RF7 BX276092.2-201ENST00000417668 665 ntBASIC25.23■■□□□ 1.63
PDS5AQ29RF7 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC25.23■■□□□ 1.63
PDS5AQ29RF7 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC25.23■■□□□ 1.63
PDS5AQ29RF7 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC25.23■■□□□ 1.63
PDS5AQ29RF7 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
PDS5AQ29RF7 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PDS5AQ29RF7 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC25.22■■□□□ 1.63
PDS5AQ29RF7 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC25.22■■□□□ 1.63
PDS5AQ29RF7 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC25.22■■□□□ 1.63
PDS5AQ29RF7 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PDS5AQ29RF7 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC25.22■■□□□ 1.63
PDS5AQ29RF7 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC25.22■■□□□ 1.63
PDS5AQ29RF7 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
PDS5AQ29RF7 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PDS5AQ29RF7 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
PDS5AQ29RF7 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
PDS5AQ29RF7 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
PDS5AQ29RF7 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PDS5AQ29RF7 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC25.22■■□□□ 1.63
PDS5AQ29RF7 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
PDS5AQ29RF7 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
PDS5AQ29RF7 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC25.21■■□□□ 1.63
PDS5AQ29RF7 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
PDS5AQ29RF7 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC25.21■■□□□ 1.63
PDS5AQ29RF7 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
PDS5AQ29RF7 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.62
PDS5AQ29RF7 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
PDS5AQ29RF7 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC25.2■■□□□ 1.62
PDS5AQ29RF7 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC25.2■■□□□ 1.62
PDS5AQ29RF7 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PDS5AQ29RF7 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PDS5AQ29RF7 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PDS5AQ29RF7 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PDS5AQ29RF7 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PDS5AQ29RF7 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PDS5AQ29RF7 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
PDS5AQ29RF7 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC25.19■■□□□ 1.62
PDS5AQ29RF7 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
PDS5AQ29RF7 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC25.19■■□□□ 1.62
PDS5AQ29RF7 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC25.19■■□□□ 1.62
PDS5AQ29RF7 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PDS5AQ29RF7 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PDS5AQ29RF7 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
PDS5AQ29RF7 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC25.19■■□□□ 1.62
PDS5AQ29RF7 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC25.19■■□□□ 1.62
PDS5AQ29RF7 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
PDS5AQ29RF7 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
PDS5AQ29RF7 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
PDS5AQ29RF7 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PDS5AQ29RF7 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
PDS5AQ29RF7 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC25.18■■□□□ 1.62
PDS5AQ29RF7 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC25.18■■□□□ 1.62
PDS5AQ29RF7 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
PDS5AQ29RF7 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PDS5AQ29RF7 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PDS5AQ29RF7 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
PDS5AQ29RF7 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC25.17■■□□□ 1.62
PDS5AQ29RF7 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PDS5AQ29RF7 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PDS5AQ29RF7 AC007322.3-201ENST00000426526 701 ntBASIC25.17■■□□□ 1.62
PDS5AQ29RF7 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
PDS5AQ29RF7 AC091874.3-201ENST00000512672 1195 ntBASIC25.17■■□□□ 1.62
PDS5AQ29RF7 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
PDS5AQ29RF7 AC083880.1-201ENST00000608266 535 ntBASIC25.17■■□□□ 1.62
PDS5AQ29RF7 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PDS5AQ29RF7 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PDS5AQ29RF7 ME2-206ENST00000638410 2289 ntTSL 5 BASIC25.17■■□□□ 1.62
PDS5AQ29RF7 ME2-210ENST00000639255 2262 ntTSL 5 BASIC25.17■■□□□ 1.62
PDS5AQ29RF7 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC25.17■■□□□ 1.62
PDS5AQ29RF7 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
PDS5AQ29RF7 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC25.17■■□□□ 1.62
PDS5AQ29RF7 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
PDS5AQ29RF7 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC25.16■■□□□ 1.62
PDS5AQ29RF7 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC25.16■■□□□ 1.62
PDS5AQ29RF7 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC25.16■■□□□ 1.62
PDS5AQ29RF7 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PDS5AQ29RF7 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC25.16■■□□□ 1.62
PDS5AQ29RF7 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
PDS5AQ29RF7 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC25.16■■□□□ 1.62
PDS5AQ29RF7 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
PDS5AQ29RF7 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PDS5AQ29RF7 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PDS5AQ29RF7 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
PDS5AQ29RF7 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC25.16■■□□□ 1.62
PDS5AQ29RF7 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
PDS5AQ29RF7 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PDS5AQ29RF7 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
PDS5AQ29RF7 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
PDS5AQ29RF7 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC25.15■■□□□ 1.62
PDS5AQ29RF7 VMO1-204ENST00000441199 741 ntTSL 2 BASIC25.15■■□□□ 1.62
PDS5AQ29RF7 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC25.15■■□□□ 1.62
PDS5AQ29RF7 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC25.15■■□□□ 1.62
PDS5AQ29RF7 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC25.15■■□□□ 1.62
PDS5AQ29RF7 RHEB-204ENST00000472642 900 ntTSL 3 BASIC25.15■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms