Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
RAB38P57729 AC245052.3-201ENST00000450182 901 ntBASIC19.7■□□□□ 0.74
RAB38P57729 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.7■□□□□ 0.74
RAB38P57729 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.7■□□□□ 0.74
RAB38P57729 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RAB38P57729 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAB38P57729 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.7■□□□□ 0.74
RAB38P57729 BID-214ENST00000617586 542 ntTSL 5 BASIC19.7■□□□□ 0.74
RAB38P57729 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
RAB38P57729 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAB38P57729 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
RAB38P57729 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAB38P57729 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAB38P57729 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.7■□□□□ 0.74
RAB38P57729 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RAB38P57729 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAB38P57729 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.69■□□□□ 0.74
RAB38P57729 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
RAB38P57729 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAB38P57729 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RAB38P57729 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAB38P57729 MFSD11-216ENST00000590393 1141 ntBASIC19.69■□□□□ 0.74
RAB38P57729 AC092666.2-201ENST00000613287 246 ntBASIC19.69■□□□□ 0.74
RAB38P57729 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
RAB38P57729 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.69■□□□□ 0.74
RAB38P57729 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAB38P57729 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAB38P57729 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RAB38P57729 AC004911.1-201ENST00000416316 871 ntBASIC19.68■□□□□ 0.74
RAB38P57729 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.68■□□□□ 0.74
RAB38P57729 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.68■□□□□ 0.74
RAB38P57729 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
RAB38P57729 AC011767.1-201ENST00000617410 1153 ntBASIC19.68■□□□□ 0.74
RAB38P57729 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RAB38P57729 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.68■□□□□ 0.74
RAB38P57729 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.68■□□□□ 0.74
RAB38P57729 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.68■□□□□ 0.74
RAB38P57729 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RAB38P57729 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RAB38P57729 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RAB38P57729 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB38P57729 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB38P57729 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB38P57729 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB38P57729 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB38P57729 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB38P57729 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.67■□□□□ 0.74
RAB38P57729 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.67■□□□□ 0.74
RAB38P57729 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.67■□□□□ 0.74
RAB38P57729 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
RAB38P57729 AC243732.1-201ENST00000612648 864 ntBASIC19.67■□□□□ 0.74
RAB38P57729 AC010536.3-201ENST00000620306 533 ntBASIC19.67■□□□□ 0.74
RAB38P57729 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.67■□□□□ 0.74
RAB38P57729 RARRES2P11-201ENST00000635158 484 ntBASIC19.67■□□□□ 0.74
RAB38P57729 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB38P57729 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
RAB38P57729 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB38P57729 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB38P57729 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB38P57729 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RAB38P57729 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.66■□□□□ 0.74
RAB38P57729 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RAB38P57729 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RAB38P57729 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RAB38P57729 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.66■□□□□ 0.74
RAB38P57729 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB38P57729 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB38P57729 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB38P57729 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB38P57729 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RAB38P57729 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.66■□□□□ 0.74
RAB38P57729 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.66■□□□□ 0.74
RAB38P57729 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.66■□□□□ 0.74
RAB38P57729 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RAB38P57729 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RAB38P57729 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB38P57729 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB38P57729 FEM1AP4-201ENST00000443167 1987 ntBASIC19.66■□□□□ 0.74
RAB38P57729 RBM17P2-201ENST00000616397 1405 ntBASIC19.66■□□□□ 0.74
RAB38P57729 AL024507.2-201ENST00000606070 2574 ntBASIC19.66■□□□□ 0.74
RAB38P57729 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB38P57729 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB38P57729 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RAB38P57729 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
RAB38P57729 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB38P57729 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB38P57729 AC026310.3-201ENST00000625186 2373 ntBASIC19.65■□□□□ 0.74
RAB38P57729 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB38P57729 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.65■□□□□ 0.74
RAB38P57729 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB38P57729 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB38P57729 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RAB38P57729 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB38P57729 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.65■□□□□ 0.74
RAB38P57729 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB38P57729 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RAB38P57729 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RAB38P57729 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RAB38P57729 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.65■□□□□ 0.74
RAB38P57729 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms