Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.73■□□□□ 0.59
CLDN18P56856 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN18P56856 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CLDN18P56856 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.73■□□□□ 0.59
CLDN18P56856 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.73■□□□□ 0.59
CLDN18P56856 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
CLDN18P56856 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CLDN18P56856 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN18P56856 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN18P56856 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN18P56856 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN18P56856 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.72■□□□□ 0.59
CLDN18P56856 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN18P56856 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN18P56856 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.72■□□□□ 0.59
CLDN18P56856 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN18P56856 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN18P56856 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.72■□□□□ 0.59
CLDN18P56856 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN18P56856 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN18P56856 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.72■□□□□ 0.59
CLDN18P56856 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN18P56856 GUSBP6-202ENST00000438529 1198 ntBASIC18.72■□□□□ 0.59
CLDN18P56856 TSPY6P-201ENST00000448518 926 ntBASIC18.72■□□□□ 0.59
CLDN18P56856 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
CLDN18P56856 AF201337.1-201ENST00000520239 748 ntBASIC18.72■□□□□ 0.59
CLDN18P56856 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.72■□□□□ 0.59
CLDN18P56856 AL162412.1-201ENST00000567129 965 ntBASIC18.72■□□□□ 0.59
CLDN18P56856 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN18P56856 AL591742.1-201ENST00000604433 565 ntBASIC18.72■□□□□ 0.59
CLDN18P56856 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.72■□□□□ 0.59
CLDN18P56856 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN18P56856 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN18P56856 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN18P56856 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN18P56856 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN18P56856 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.71■□□□□ 0.59
CLDN18P56856 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.71■□□□□ 0.59
CLDN18P56856 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.71■□□□□ 0.59
CLDN18P56856 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN18P56856 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN18P56856 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN18P56856 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN18P56856 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN18P56856 AC091799.1-201ENST00000422823 811 ntBASIC18.71■□□□□ 0.59
CLDN18P56856 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CLDN18P56856 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN18P56856 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.71■□□□□ 0.59
CLDN18P56856 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.71■□□□□ 0.59
CLDN18P56856 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN18P56856 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.71■□□□□ 0.59
CLDN18P56856 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN18P56856 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN18P56856 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN18P56856 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN18P56856 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CLDN18P56856 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN18P56856 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.71■□□□□ 0.59
CLDN18P56856 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.58
CLDN18P56856 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN18P56856 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN18P56856 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN18P56856 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN18P56856 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN18P56856 AC105036.2-201ENST00000569468 176 ntBASIC18.7■□□□□ 0.58
CLDN18P56856 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.7■□□□□ 0.58
CLDN18P56856 AC244015.2-201ENST00000616358 1861 ntBASIC18.7■□□□□ 0.58
CLDN18P56856 OR10C1-204ENST00000622521 1039 ntBASIC18.7■□□□□ 0.58
CLDN18P56856 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.7■□□□□ 0.58
CLDN18P56856 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CLDN18P56856 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN18P56856 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN18P56856 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.69■□□□□ 0.58
CLDN18P56856 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN18P56856 FBXW4P1-201ENST00000426721 2239 ntBASIC18.69■□□□□ 0.58
CLDN18P56856 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN18P56856 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.69■□□□□ 0.58
CLDN18P56856 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.69■□□□□ 0.58
CLDN18P56856 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN18P56856 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CLDN18P56856 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN18P56856 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
CLDN18P56856 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN18P56856 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.69■□□□□ 0.58
CLDN18P56856 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.69■□□□□ 0.58
CLDN18P56856 AC069236.1-201ENST00000604339 616 ntBASIC18.69■□□□□ 0.58
CLDN18P56856 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
CLDN18P56856 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.69■□□□□ 0.58
CLDN18P56856 AC008694.1-202ENST00000636953 945 ntBASIC18.69■□□□□ 0.58
CLDN18P56856 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN18P56856 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN18P56856 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CLDN18P56856 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.69■□□□□ 0.58
CLDN18P56856 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN18P56856 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN18P56856 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN18P56856 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.68■□□□□ 0.58
CLDN18P56856 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN18P56856 AL355802.2-201ENST00000402069 882 ntBASIC18.68■□□□□ 0.58
CLDN18P56856 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms