Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ATXN1P54253 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ATXN1P54253 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.96■■□□□ 1.11
ATXN1P54253 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ATXN1P54253 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.96■■□□□ 1.11
ATXN1P54253 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ATXN1P54253 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
ATXN1P54253 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
ATXN1P54253 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.96■■□□□ 1.11
ATXN1P54253 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.96■■□□□ 1.11
ATXN1P54253 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ATXN1P54253 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
ATXN1P54253 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ATXN1P54253 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.95■■□□□ 1.1
ATXN1P54253 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
ATXN1P54253 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.95■■□□□ 1.1
ATXN1P54253 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.95■■□□□ 1.1
ATXN1P54253 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.95■■□□□ 1.1
ATXN1P54253 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.95■■□□□ 1.1
ATXN1P54253 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
ATXN1P54253 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.95■■□□□ 1.1
ATXN1P54253 AC061975.6-201ENST00000579045 1553 ntBASIC21.95■■□□□ 1.1
ATXN1P54253 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ATXN1P54253 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
ATXN1P54253 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ATXN1P54253 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
ATXN1P54253 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ATXN1P54253 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.94■■□□□ 1.1
ATXN1P54253 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.94■■□□□ 1.1
ATXN1P54253 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ATXN1P54253 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ATXN1P54253 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.94■■□□□ 1.1
ATXN1P54253 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.94■■□□□ 1.1
ATXN1P54253 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC21.94■■□□□ 1.1
ATXN1P54253 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.94■■□□□ 1.1
ATXN1P54253 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.94■■□□□ 1.1
ATXN1P54253 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.94■■□□□ 1.1
ATXN1P54253 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.94■■□□□ 1.1
ATXN1P54253 AL024507.2-201ENST00000606070 2574 ntBASIC21.94■■□□□ 1.1
ATXN1P54253 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ATXN1P54253 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ATXN1P54253 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ATXN1P54253 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.93■■□□□ 1.1
ATXN1P54253 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
ATXN1P54253 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.93■■□□□ 1.1
ATXN1P54253 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.93■■□□□ 1.1
ATXN1P54253 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.93■■□□□ 1.1
ATXN1P54253 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.93■■□□□ 1.1
ATXN1P54253 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
ATXN1P54253 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ATXN1P54253 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
ATXN1P54253 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
ATXN1P54253 AC005229.4-201ENST00000610085 2198 ntBASIC21.92■■□□□ 1.1
ATXN1P54253 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
ATXN1P54253 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
ATXN1P54253 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
ATXN1P54253 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.92■■□□□ 1.1
ATXN1P54253 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.92■■□□□ 1.1
ATXN1P54253 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
ATXN1P54253 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.92■■□□□ 1.1
ATXN1P54253 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
ATXN1P54253 AC138907.5-202ENST00000569484 235 ntBASIC21.92■■□□□ 1.1
ATXN1P54253 AC011767.1-201ENST00000617410 1153 ntBASIC21.92■■□□□ 1.1
ATXN1P54253 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
ATXN1P54253 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ATXN1P54253 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
ATXN1P54253 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
ATXN1P54253 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
ATXN1P54253 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
ATXN1P54253 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.91■■□□□ 1.1
ATXN1P54253 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ATXN1P54253 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
ATXN1P54253 FEM1AP4-201ENST00000443167 1987 ntBASIC21.91■■□□□ 1.1
ATXN1P54253 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ATXN1P54253 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.91■■□□□ 1.1
ATXN1P54253 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.91■■□□□ 1.1
ATXN1P54253 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.91■■□□□ 1.1
ATXN1P54253 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ATXN1P54253 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
ATXN1P54253 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.91■■□□□ 1.1
ATXN1P54253 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
ATXN1P54253 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
ATXN1P54253 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.91■■□□□ 1.1
ATXN1P54253 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
ATXN1P54253 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
ATXN1P54253 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.9■■□□□ 1.1
ATXN1P54253 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
ATXN1P54253 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
ATXN1P54253 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.9■■□□□ 1.1
ATXN1P54253 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.9■■□□□ 1.1
ATXN1P54253 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.9■■□□□ 1.1
ATXN1P54253 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.9■■□□□ 1.1
ATXN1P54253 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.9■■□□□ 1.1
ATXN1P54253 AP001160.3-201ENST00000601484 763 ntBASIC21.9■■□□□ 1.1
ATXN1P54253 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ATXN1P54253 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
ATXN1P54253 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
ATXN1P54253 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
ATXN1P54253 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ATXN1P54253 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms