Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SMSP52788 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
SMSP52788 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SMSP52788 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.52■□□□□ 0.71
SMSP52788 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMSP52788 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMSP52788 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMSP52788 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SMSP52788 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
SMSP52788 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMSP52788 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SMSP52788 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SMSP52788 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.71
SMSP52788 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMSP52788 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SMSP52788 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
SMSP52788 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMSP52788 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
SMSP52788 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.51■□□□□ 0.71
SMSP52788 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.51■□□□□ 0.71
SMSP52788 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMSP52788 BX005040.4-201ENST00000637145 1518 ntBASIC19.51■□□□□ 0.71
SMSP52788 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMSP52788 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
SMSP52788 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.5■□□□□ 0.71
SMSP52788 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMSP52788 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
SMSP52788 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMSP52788 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.5■□□□□ 0.71
SMSP52788 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.5■□□□□ 0.71
SMSP52788 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SMSP52788 KRT18P11-201ENST00000435214 1283 ntBASIC19.5■□□□□ 0.71
SMSP52788 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.5■□□□□ 0.71
SMSP52788 AC079089.2-201ENST00000531211 1277 ntBASIC19.5■□□□□ 0.71
SMSP52788 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.5■□□□□ 0.71
SMSP52788 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SMSP52788 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.5■□□□□ 0.71
SMSP52788 RAP2CP1-201ENST00000605103 478 ntBASIC19.5■□□□□ 0.71
SMSP52788 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
SMSP52788 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
SMSP52788 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SMSP52788 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
SMSP52788 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMSP52788 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMSP52788 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
SMSP52788 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SMSP52788 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMSP52788 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SMSP52788 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SMSP52788 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMSP52788 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMSP52788 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.49■□□□□ 0.71
SMSP52788 AP004607.4-201ENST00000530158 1459 ntBASIC19.49■□□□□ 0.71
SMSP52788 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SMSP52788 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
SMSP52788 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMSP52788 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMSP52788 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMSP52788 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMSP52788 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SMSP52788 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.49■□□□□ 0.71
SMSP52788 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.49■□□□□ 0.71
SMSP52788 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMSP52788 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMSP52788 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SMSP52788 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMSP52788 AF106564.1-201ENST00000607058 2553 ntBASIC19.48■□□□□ 0.71
SMSP52788 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMSP52788 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SMSP52788 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.48■□□□□ 0.71
SMSP52788 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMSP52788 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SMSP52788 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMSP52788 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMSP52788 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.48■□□□□ 0.71
SMSP52788 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.48■□□□□ 0.71
SMSP52788 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.48■□□□□ 0.71
SMSP52788 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.48■□□□□ 0.71
SMSP52788 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
SMSP52788 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
SMSP52788 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
SMSP52788 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMSP52788 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.48■□□□□ 0.71
SMSP52788 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMSP52788 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SMSP52788 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SMSP52788 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMSP52788 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SMSP52788 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMSP52788 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.47■□□□□ 0.71
SMSP52788 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.47■□□□□ 0.71
SMSP52788 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SMSP52788 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMSP52788 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
SMSP52788 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMSP52788 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SMSP52788 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.47■□□□□ 0.71
SMSP52788 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.47■□□□□ 0.71
SMSP52788 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.47■□□□□ 0.71
SMSP52788 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms