Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
HCFC1P51610 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HCFC1P51610 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.32■□□□□ 0.52
HCFC1P51610 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HCFC1P51610 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.32■□□□□ 0.52
HCFC1P51610 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
HCFC1P51610 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HCFC1P51610 AC091799.1-201ENST00000422823 811 ntBASIC18.32■□□□□ 0.52
HCFC1P51610 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.32■□□□□ 0.52
HCFC1P51610 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HCFC1P51610 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HCFC1P51610 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HCFC1P51610 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HCFC1P51610 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HCFC1P51610 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
HCFC1P51610 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HCFC1P51610 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HCFC1P51610 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HCFC1P51610 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HCFC1P51610 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HCFC1P51610 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.31■□□□□ 0.52
HCFC1P51610 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.31■□□□□ 0.52
HCFC1P51610 AL359736.2-201ENST00000621992 437 ntBASIC18.31■□□□□ 0.52
HCFC1P51610 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HCFC1P51610 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
HCFC1P51610 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HCFC1P51610 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
HCFC1P51610 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HCFC1P51610 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.3■□□□□ 0.52
HCFC1P51610 AC008550.1-201ENST00000511500 884 ntBASIC18.3■□□□□ 0.52
HCFC1P51610 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HCFC1P51610 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.3■□□□□ 0.52
HCFC1P51610 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
HCFC1P51610 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HCFC1P51610 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
HCFC1P51610 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HCFC1P51610 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HCFC1P51610 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HCFC1P51610 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.3■□□□□ 0.52
HCFC1P51610 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.3■□□□□ 0.52
HCFC1P51610 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.3■□□□□ 0.52
HCFC1P51610 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.3■□□□□ 0.52
HCFC1P51610 CYP2T3P-201ENST00000601990 817 ntBASIC18.3■□□□□ 0.52
HCFC1P51610 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HCFC1P51610 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
HCFC1P51610 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HCFC1P51610 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HCFC1P51610 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HCFC1P51610 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC18.29■□□□□ 0.52
HCFC1P51610 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HCFC1P51610 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.29■□□□□ 0.52
HCFC1P51610 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HCFC1P51610 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.29■□□□□ 0.52
HCFC1P51610 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HCFC1P51610 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
HCFC1P51610 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.29■□□□□ 0.52
HCFC1P51610 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HCFC1P51610 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
HCFC1P51610 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC18.29■□□□□ 0.52
HCFC1P51610 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HCFC1P51610 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.29■□□□□ 0.52
HCFC1P51610 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.28■□□□□ 0.52
HCFC1P51610 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HCFC1P51610 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HCFC1P51610 FAM197Y4-202ENST00000622692 608 ntBASIC18.28■□□□□ 0.52
HCFC1P51610 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.28■□□□□ 0.52
HCFC1P51610 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HCFC1P51610 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HCFC1P51610 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
HCFC1P51610 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HCFC1P51610 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HCFC1P51610 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HCFC1P51610 AC007322.3-201ENST00000426526 701 ntBASIC18.28■□□□□ 0.52
HCFC1P51610 RPS2P4-201ENST00000476944 856 ntBASIC18.28■□□□□ 0.52
HCFC1P51610 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
HCFC1P51610 PNMA6B-201ENST00000538162 1200 ntBASIC18.28■□□□□ 0.52
HCFC1P51610 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HCFC1P51610 AC073648.6-201ENST00000641589 218 ntBASIC18.28■□□□□ 0.52
HCFC1P51610 AC003102.1-202ENST00000563394 1796 ntBASIC18.28■□□□□ 0.52
HCFC1P51610 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HCFC1P51610 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HCFC1P51610 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.27■□□□□ 0.52
HCFC1P51610 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HCFC1P51610 LSM12P1-201ENST00000411836 588 ntBASIC18.27■□□□□ 0.52
HCFC1P51610 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.27■□□□□ 0.52
HCFC1P51610 UBE2SP1-201ENST00000450587 669 ntBASIC18.27■□□□□ 0.52
HCFC1P51610 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HCFC1P51610 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HCFC1P51610 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
HCFC1P51610 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.27■□□□□ 0.52
HCFC1P51610 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
HCFC1P51610 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
HCFC1P51610 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.27■□□□□ 0.51
HCFC1P51610 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
HCFC1P51610 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.27■□□□□ 0.51
HCFC1P51610 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.27■□□□□ 0.51
HCFC1P51610 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.27■□□□□ 0.51
HCFC1P51610 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HCFC1P51610 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HCFC1P51610 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms