Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CLK3P49761 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.73■□□□□ 0.75
CLK3P49761 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.73■□□□□ 0.75
CLK3P49761 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLK3P49761 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CLK3P49761 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLK3P49761 BX005040.4-201ENST00000637145 1518 ntBASIC19.72■□□□□ 0.75
CLK3P49761 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLK3P49761 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLK3P49761 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLK3P49761 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLK3P49761 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLK3P49761 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLK3P49761 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.72■□□□□ 0.75
CLK3P49761 AC009237.3-201ENST00000393279 1427 ntBASIC19.72■□□□□ 0.75
CLK3P49761 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.72■□□□□ 0.75
CLK3P49761 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLK3P49761 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CLK3P49761 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.72■□□□□ 0.75
CLK3P49761 AC026471.6-201ENST00000622954 1905 ntBASIC19.72■□□□□ 0.75
CLK3P49761 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CLK3P49761 LINC01006-201ENST00000333319 2292 ntBASIC19.72■□□□□ 0.75
CLK3P49761 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLK3P49761 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLK3P49761 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLK3P49761 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLK3P49761 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLK3P49761 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLK3P49761 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CLK3P49761 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLK3P49761 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLK3P49761 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.71■□□□□ 0.75
CLK3P49761 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLK3P49761 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLK3P49761 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.71■□□□□ 0.75
CLK3P49761 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.71■□□□□ 0.75
CLK3P49761 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.71■□□□□ 0.75
CLK3P49761 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CLK3P49761 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLK3P49761 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.71■□□□□ 0.75
CLK3P49761 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CLK3P49761 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLK3P49761 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLK3P49761 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLK3P49761 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLK3P49761 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.7■□□□□ 0.74
CLK3P49761 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.7■□□□□ 0.74
CLK3P49761 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLK3P49761 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CLK3P49761 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLK3P49761 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.7■□□□□ 0.74
CLK3P49761 ZNRF2P3-201ENST00000424200 374 ntBASIC19.7■□□□□ 0.74
CLK3P49761 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLK3P49761 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.7■□□□□ 0.74
CLK3P49761 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.7■□□□□ 0.74
CLK3P49761 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLK3P49761 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLK3P49761 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.7■□□□□ 0.74
CLK3P49761 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLK3P49761 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.7■□□□□ 0.74
CLK3P49761 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLK3P49761 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CLK3P49761 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLK3P49761 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
CLK3P49761 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLK3P49761 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.69■□□□□ 0.74
CLK3P49761 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLK3P49761 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CLK3P49761 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLK3P49761 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLK3P49761 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.69■□□□□ 0.74
CLK3P49761 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.69■□□□□ 0.74
CLK3P49761 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CLK3P49761 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLK3P49761 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.68■□□□□ 0.74
CLK3P49761 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLK3P49761 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLK3P49761 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLK3P49761 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLK3P49761 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLK3P49761 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLK3P49761 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.68■□□□□ 0.74
CLK3P49761 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CLK3P49761 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLK3P49761 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLK3P49761 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.68■□□□□ 0.74
CLK3P49761 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CLK3P49761 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLK3P49761 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CLK3P49761 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLK3P49761 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLK3P49761 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.68■□□□□ 0.74
CLK3P49761 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLK3P49761 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.68■□□□□ 0.74
CLK3P49761 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
CLK3P49761 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.68■□□□□ 0.74
CLK3P49761 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLK3P49761 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLK3P49761 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLK3P49761 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms