Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC1A6P48664 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SLC1A6P48664 SERBP1P1-201ENST00000396021 1160 ntBASIC20.53■□□□□ 0.88
SLC1A6P48664 SLC47A1P1-202ENST00000449666 945 ntBASIC20.53■□□□□ 0.88
SLC1A6P48664 AL512631.2-201ENST00000604634 923 ntBASIC20.53■□□□□ 0.88
SLC1A6P48664 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SLC1A6P48664 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.53■□□□□ 0.88
SLC1A6P48664 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
SLC1A6P48664 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC1A6P48664 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
SLC1A6P48664 AC007952.6-201ENST00000573168 2673 ntBASIC20.52■□□□□ 0.88
SLC1A6P48664 AC003957.1-201ENST00000625108 2673 ntBASIC20.52■□□□□ 0.88
SLC1A6P48664 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC1A6P48664 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.52■□□□□ 0.88
SLC1A6P48664 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC1A6P48664 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.52■□□□□ 0.88
SLC1A6P48664 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
SLC1A6P48664 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC1A6P48664 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.52■□□□□ 0.88
SLC1A6P48664 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.52■□□□□ 0.88
SLC1A6P48664 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.52■□□□□ 0.88
SLC1A6P48664 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC1A6P48664 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.52■□□□□ 0.88
SLC1A6P48664 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.52■□□□□ 0.87
SLC1A6P48664 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.87
SLC1A6P48664 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC1A6P48664 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
SLC1A6P48664 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC1A6P48664 SYT6-210ENST00000641643 1587 ntBASIC20.51■□□□□ 0.87
SLC1A6P48664 AC007225.1-201ENST00000566331 1836 ntBASIC20.51■□□□□ 0.87
SLC1A6P48664 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.51■□□□□ 0.87
SLC1A6P48664 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC1A6P48664 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.51■□□□□ 0.87
SLC1A6P48664 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC1A6P48664 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SLC1A6P48664 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SLC1A6P48664 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SLC1A6P48664 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
SLC1A6P48664 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC1A6P48664 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.51■□□□□ 0.87
SLC1A6P48664 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.51■□□□□ 0.87
SLC1A6P48664 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
SLC1A6P48664 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.51■□□□□ 0.87
SLC1A6P48664 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC1A6P48664 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC1A6P48664 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC1A6P48664 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.51■□□□□ 0.87
SLC1A6P48664 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC1A6P48664 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
SLC1A6P48664 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC1A6P48664 AFG3L1P-217ENST00000557444 2447 ntBASIC20.51■□□□□ 0.87
SLC1A6P48664 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC1A6P48664 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SLC1A6P48664 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SLC1A6P48664 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.5■□□□□ 0.87
SLC1A6P48664 AC136469.2-201ENST00000623944 1028 ntBASIC20.5■□□□□ 0.87
SLC1A6P48664 AC020907.5-201ENST00000624372 1936 ntBASIC20.5■□□□□ 0.87
SLC1A6P48664 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.5■□□□□ 0.87
SLC1A6P48664 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
SLC1A6P48664 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.5■□□□□ 0.87
SLC1A6P48664 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC1A6P48664 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
SLC1A6P48664 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC1A6P48664 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SLC1A6P48664 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC1A6P48664 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SLC1A6P48664 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC1A6P48664 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC1A6P48664 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC1A6P48664 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SLC1A6P48664 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SLC1A6P48664 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.49■□□□□ 0.87
SLC1A6P48664 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.49■□□□□ 0.87
SLC1A6P48664 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.49■□□□□ 0.87
SLC1A6P48664 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SLC1A6P48664 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.49■□□□□ 0.87
SLC1A6P48664 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC1A6P48664 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC1A6P48664 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.49■□□□□ 0.87
SLC1A6P48664 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.49■□□□□ 0.87
SLC1A6P48664 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.49■□□□□ 0.87
SLC1A6P48664 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
SLC1A6P48664 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SLC1A6P48664 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
SLC1A6P48664 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC1A6P48664 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
SLC1A6P48664 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC1A6P48664 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.48■□□□□ 0.87
SLC1A6P48664 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC1A6P48664 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.48■□□□□ 0.87
SLC1A6P48664 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.48■□□□□ 0.87
SLC1A6P48664 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC1A6P48664 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC1A6P48664 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SLC1A6P48664 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.48■□□□□ 0.87
SLC1A6P48664 DUX4L19-201ENST00000557448 1267 ntBASIC20.48■□□□□ 0.87
SLC1A6P48664 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.48■□□□□ 0.87
SLC1A6P48664 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
SLC1A6P48664 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.48■□□□□ 0.87
SLC1A6P48664 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms