Protein–RNA interactions for Protein: P48443

RXRG, Retinoic acid receptor RXR-gamma, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRGP48443 AC007375.3-201ENST00000600936 2314 ntBASIC20.84■□□□□ 0.93
RXRGP48443 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.84■□□□□ 0.93
RXRGP48443 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
RXRGP48443 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RXRGP48443 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.84■□□□□ 0.93
RXRGP48443 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.84■□□□□ 0.93
RXRGP48443 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RXRGP48443 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.84■□□□□ 0.93
RXRGP48443 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RXRGP48443 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RXRGP48443 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RXRGP48443 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.84■□□□□ 0.93
RXRGP48443 CYP2T1P-201ENST00000432607 1285 ntBASIC20.84■□□□□ 0.93
RXRGP48443 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.84■□□□□ 0.93
RXRGP48443 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RXRGP48443 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RXRGP48443 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
RXRGP48443 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
RXRGP48443 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RXRGP48443 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.84■□□□□ 0.93
RXRGP48443 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RXRGP48443 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RXRGP48443 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
RXRGP48443 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
RXRGP48443 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RXRGP48443 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RXRGP48443 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RXRGP48443 AL512625.2-201ENST00000417533 625 ntBASIC20.83■□□□□ 0.93
RXRGP48443 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RXRGP48443 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.83■□□□□ 0.93
RXRGP48443 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.83■□□□□ 0.93
RXRGP48443 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.83■□□□□ 0.93
RXRGP48443 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RXRGP48443 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RXRGP48443 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RXRGP48443 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.83■□□□□ 0.92
RXRGP48443 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.83■□□□□ 0.92
RXRGP48443 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RXRGP48443 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
RXRGP48443 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RXRGP48443 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RXRGP48443 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RXRGP48443 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RXRGP48443 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RXRGP48443 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RXRGP48443 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
RXRGP48443 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.82■□□□□ 0.92
RXRGP48443 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.82■□□□□ 0.92
RXRGP48443 AC098934.4-201ENST00000564127 592 ntBASIC20.82■□□□□ 0.92
RXRGP48443 MIR4651-201ENST00000582622 73 ntBASIC20.82■□□□□ 0.92
RXRGP48443 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.82■□□□□ 0.92
RXRGP48443 AC008175.2-201ENST00000612840 297 ntBASIC20.82■□□□□ 0.92
RXRGP48443 AC120498.10-201ENST00000621827 505 ntBASIC20.82■□□□□ 0.92
RXRGP48443 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.82■□□□□ 0.92
RXRGP48443 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RXRGP48443 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.82■□□□□ 0.92
RXRGP48443 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
RXRGP48443 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RXRGP48443 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RXRGP48443 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
RXRGP48443 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RXRGP48443 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RXRGP48443 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
RXRGP48443 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RXRGP48443 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RXRGP48443 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RXRGP48443 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RXRGP48443 MIPEPP3-201ENST00000412105 444 ntBASIC20.81■□□□□ 0.92
RXRGP48443 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RXRGP48443 POU5F1P4-201ENST00000413175 1085 ntBASIC20.81■□□□□ 0.92
RXRGP48443 FAM201B-201ENST00000458407 597 ntBASIC20.81■□□□□ 0.92
RXRGP48443 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RXRGP48443 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.81■□□□□ 0.92
RXRGP48443 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.81■□□□□ 0.92
RXRGP48443 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.81■□□□□ 0.92
RXRGP48443 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.81■□□□□ 0.92
RXRGP48443 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.81■□□□□ 0.92
RXRGP48443 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.81■□□□□ 0.92
RXRGP48443 AC066615.1-201ENST00000640911 628 ntBASIC20.81■□□□□ 0.92
RXRGP48443 MKRN4P-201ENST00000444706 1521 ntBASIC20.81■□□□□ 0.92
RXRGP48443 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.81■□□□□ 0.92
RXRGP48443 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RXRGP48443 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RXRGP48443 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RXRGP48443 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
RXRGP48443 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RXRGP48443 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RXRGP48443 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
RXRGP48443 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RXRGP48443 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RXRGP48443 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.8■□□□□ 0.92
RXRGP48443 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
RXRGP48443 AC008694.1-202ENST00000636953 945 ntBASIC20.8■□□□□ 0.92
RXRGP48443 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
RXRGP48443 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RXRGP48443 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RXRGP48443 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RXRGP48443 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
RXRGP48443 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RXRGP48443 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms