Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 AC016405.3-201ENST00000607710 860 ntBASIC19.9■□□□□ 0.78
GABRA4P48169 OR10C1-204ENST00000622521 1039 ntBASIC19.9■□□□□ 0.78
GABRA4P48169 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.9■□□□□ 0.78
GABRA4P48169 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.9■□□□□ 0.78
GABRA4P48169 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
GABRA4P48169 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GABRA4P48169 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.9■□□□□ 0.78
GABRA4P48169 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
GABRA4P48169 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
GABRA4P48169 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
GABRA4P48169 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GABRA4P48169 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.78
GABRA4P48169 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GABRA4P48169 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GABRA4P48169 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GABRA4P48169 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GABRA4P48169 AC245052.3-201ENST00000450182 901 ntBASIC19.89■□□□□ 0.77
GABRA4P48169 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
GABRA4P48169 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.89■□□□□ 0.77
GABRA4P48169 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
GABRA4P48169 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
GABRA4P48169 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
GABRA4P48169 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.89■□□□□ 0.77
GABRA4P48169 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.89■□□□□ 0.77
GABRA4P48169 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
GABRA4P48169 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.89■□□□□ 0.77
GABRA4P48169 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GABRA4P48169 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
GABRA4P48169 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GABRA4P48169 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
GABRA4P48169 AL355802.2-201ENST00000402069 882 ntBASIC19.88■□□□□ 0.77
GABRA4P48169 AL512625.2-201ENST00000417533 625 ntBASIC19.88■□□□□ 0.77
GABRA4P48169 AC093787.1-201ENST00000450396 207 ntBASIC19.88■□□□□ 0.77
GABRA4P48169 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
GABRA4P48169 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.88■□□□□ 0.77
GABRA4P48169 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GABRA4P48169 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.88■□□□□ 0.77
GABRA4P48169 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
GABRA4P48169 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
GABRA4P48169 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GABRA4P48169 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
GABRA4P48169 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
GABRA4P48169 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
GABRA4P48169 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.88■□□□□ 0.77
GABRA4P48169 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.88■□□□□ 0.77
GABRA4P48169 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
GABRA4P48169 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
GABRA4P48169 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
GABRA4P48169 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GABRA4P48169 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
GABRA4P48169 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.87■□□□□ 0.77
GABRA4P48169 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.87■□□□□ 0.77
GABRA4P48169 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.87■□□□□ 0.77
GABRA4P48169 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
GABRA4P48169 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
GABRA4P48169 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GABRA4P48169 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
GABRA4P48169 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
GABRA4P48169 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.86■□□□□ 0.77
GABRA4P48169 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.86■□□□□ 0.77
GABRA4P48169 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
GABRA4P48169 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
GABRA4P48169 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
GABRA4P48169 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
GABRA4P48169 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.86■□□□□ 0.77
GABRA4P48169 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.86■□□□□ 0.77
GABRA4P48169 RARRES2P4-201ENST00000514074 484 ntBASIC19.86■□□□□ 0.77
GABRA4P48169 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.86■□□□□ 0.77
GABRA4P48169 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
GABRA4P48169 AL138781.1-201ENST00000566567 1274 ntBASIC19.86■□□□□ 0.77
GABRA4P48169 AC069236.1-201ENST00000604339 616 ntBASIC19.86■□□□□ 0.77
GABRA4P48169 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
GABRA4P48169 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
GABRA4P48169 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
GABRA4P48169 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
GABRA4P48169 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GABRA4P48169 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GABRA4P48169 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
GABRA4P48169 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
GABRA4P48169 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GABRA4P48169 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.85■□□□□ 0.77
GABRA4P48169 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GABRA4P48169 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.85■□□□□ 0.77
GABRA4P48169 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
GABRA4P48169 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.85■□□□□ 0.77
GABRA4P48169 AC244015.2-201ENST00000616358 1861 ntBASIC19.85■□□□□ 0.77
GABRA4P48169 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.85■□□□□ 0.77
GABRA4P48169 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GABRA4P48169 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.85■□□□□ 0.77
GABRA4P48169 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GABRA4P48169 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GABRA4P48169 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.84■□□□□ 0.77
GABRA4P48169 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
GABRA4P48169 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
GABRA4P48169 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
GABRA4P48169 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
GABRA4P48169 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
GABRA4P48169 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
GABRA4P48169 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GABRA4P48169 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms