Protein–RNA interactions for Protein: P42843

SKP2, F-box protein SKP2, yeast

Predictions only

Length 763 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP2	P42843	PBP4	YDL053C	558 nt		3.51	□□□□□ -1.85
SKP2	P42843	GRX2	YDR513W	432 nt		3.51	□□□□□ -1.85
SKP2	P42843	YEL075C	YEL075C	369 nt		3.51	□□□□□ -1.85
SKP2	P42843	SOP4	YJL192C	705 nt		3.51	□□□□□ -1.85
SKP2	P42843	YKL070W	YKL070W	510 nt		3.51	□□□□□ -1.85
SKP2	P42843	YLR416C	YLR416C	399 nt		3.51	□□□□□ -1.85
SKP2	P42843	GRE2	YOL151W	1029 nt		3.51	□□□□□ -1.85
SKP2	P42843	BUD21	YOR078W	645 nt		3.51	□□□□□ -1.85
SKP2	P42843	HRD1	YOL013C	1656 nt		3.51	□□□□□ -1.85
SKP2	P42843	NOP4	YPL043W	2058 nt		3.51	□□□□□ -1.85
SKP2	P42843	ALA1	YOR335C	2877 nt		3.51	□□□□□ -1.85
SKP2	P42843	HMLALPHA2	YCL067C	633 nt		3.5	□□□□□ -1.85
SKP2	P42843	MATALPHA2	YCR039C	633 nt		3.5	□□□□□ -1.85
SKP2	P42843	YDL016C	YDL016C	303 nt		3.5	□□□□□ -1.85
SKP2	P42843	STE14	YDR410C	720 nt		3.5	□□□□□ -1.85
SKP2	P42843	RPL1B	YGL135W	654 nt		3.5	□□□□□ -1.85
SKP2	P42843	SYS1	YJL004C	612 nt		3.5	□□□□□ -1.85
SKP2	P42843	APQ13	YJL075C	417 nt		3.5	□□□□□ -1.85
SKP2	P42843	CPR7	YJR032W	1182 nt		3.5	□□□□□ -1.85
SKP2	P42843	YKE2	YLR200W	345 nt		3.5	□□□□□ -1.85
SKP2	P42843	RPL1A	YPL220W	654 nt		3.5	□□□□□ -1.85
SKP2	P42843	LTP1	YPR073C	486 nt		3.5	□□□□□ -1.85
SKP2	P42843	NUP60	YAR002W	1620 nt		3.5	□□□□□ -1.85
SKP2	P42843	PAM1	YDR251W	2493 nt		3.5	□□□□□ -1.85
SKP2	P42843	FAS1	YKL182W	6156 nt		3.5	□□□□□ -1.85
SKP2	P42843	ANR2	YKL047W	1551 nt		3.5	□□□□□ -1.85
SKP2	P42843	MNT4	YNR059W	1743 nt		3.5	□□□□□ -1.85
SKP2	P42843	XRS2	YDR369C	2565 nt		3.49	□□□□□ -1.85
SKP2	P42843	ARG5,6	YER069W	2592 nt		3.49	□□□□□ -1.85
SKP2	P42843	SRD1	YCR018C	666 nt		3.49	□□□□□ -1.85
SKP2	P42843	YAP6	YDR259C	1152 nt		3.49	□□□□□ -1.85
SKP2	P42843	PEX10	YDR265W	1014 nt		3.49	□□□□□ -1.85
SKP2	P42843	YDR524W-C	YDR524W-C	90 nt		3.49	□□□□□ -1.85
SKP2	P42843	PEA2	YER149C	1263 nt		3.49	□□□□□ -1.85
SKP2	P42843	YKL023C-A	YKL023C-A	228 nt		3.49	□□□□□ -1.85
SKP2	P42843	YLL044W	YLL044W	447 nt		3.49	□□□□□ -1.85
SKP2	P42843	IDP2	YLR174W	1239 nt		3.49	□□□□□ -1.85
SKP2	P42843	YLR400W	YLR400W	474 nt		3.49	□□□□□ -1.85
SKP2	P42843	GMC2	YLR445W	567 nt		3.49	□□□□□ -1.85
SKP2	P42843	GOT1	YMR292W	417 nt		3.49	□□□□□ -1.85
SKP2	P42843	YNL109W	YNL109W	546 nt		3.49	□□□□□ -1.85
SKP2	P42843	YNL184C	YNL184C	327 nt		3.49	□□□□□ -1.85
SKP2	P42843	GCY1	YOR120W	939 nt		3.49	□□□□□ -1.85
SKP2	P42843	RPS12	YOR369C	432 nt		3.49	□□□□□ -1.85
SKP2	P42843	snR35	snR35	204 nt		3.49	□□□□□ -1.85
SKP2	P42843	LST4	YKL176C	2487 nt		3.48	□□□□□ -1.85
SKP2	P42843	MIG3	YER028C	1185 nt		3.48	□□□□□ -1.85
SKP2	P42843	GIC1	YHR061C	945 nt		3.48	□□□□□ -1.85
SKP2	P42843	YKL033W-A	YKL033W-A	711 nt		3.48	□□□□□ -1.85
SKP2	P42843	YMR254C	YMR254C	309 nt		3.48	□□□□□ -1.85
SKP2	P42843	ATP19	YOL077W-A	207 nt		3.48	□□□□□ -1.85
SKP2	P42843	YOL114C	YOL114C	609 nt		3.48	□□□□□ -1.85
SKP2	P42843	HHF1	YBR009C	312 nt		3.48	□□□□□ -1.85
SKP2	P42843	CSM4	YPL200W	471 nt		3.48	□□□□□ -1.85
SKP2	P42843	IRC3	YDR332W	2070 nt		3.48	□□□□□ -1.85
SKP2	P42843	NSA1	YGL111W	1392 nt		3.48	□□□□□ -1.85
SKP2	P42843	BEM4	YPL161C	1902 nt		3.48	□□□□□ -1.85
SKP2	P42843	SWI1	YPL016W	3945 nt		3.47	□□□□□ -1.85
SKP2	P42843	OSH3	YHR073W	2991 nt		3.47	□□□□□ -1.85
SKP2	P42843	snR9	snR9	187 nt		3.47	□□□□□ -1.85
SKP2	P42843	BMH2	YDR099W	822 nt		3.47	□□□□□ -1.85
SKP2	P42843	YHR212C	YHR212C	336 nt		3.47	□□□□□ -1.85
SKP2	P42843	YIL046W-A	YIL046W-A	165 nt		3.47	□□□□□ -1.85
SKP2	P42843	YAP5	YIR018W	738 nt		3.47	□□□□□ -1.85
SKP2	P42843	BET4	YJL031C	984 nt		3.47	□□□□□ -1.85
SKP2	P42843	RPL17B	YJL177W	555 nt		3.47	□□□□□ -1.85
SKP2	P42843	IME1	YJR094C	1083 nt		3.47	□□□□□ -1.85
SKP2	P42843	YAR060C	YAR060C	336 nt		3.47	□□□□□ -1.85
SKP2	P42843	TRS20	YBR254C	528 nt		3.47	□□□□□ -1.85
SKP2	P42843	SRP68	YPL243W	1800 nt		3.47	□□□□□ -1.85
SKP2	P42843	TGL3	YMR313C	1929 nt		3.46	□□□□□ -1.85
SKP2	P42843	BRE5	YNR051C	1548 nt		3.46	□□□□□ -1.86
SKP2	P42843	snR5	snR5	204 nt		3.46	□□□□□ -1.86
SKP2	P42843	DAD1	YDR016C	285 nt		3.46	□□□□□ -1.86
SKP2	P42843	YDR431W	YDR431W	312 nt		3.46	□□□□□ -1.86
SKP2	P42843	SAE2	YGL175C	1038 nt		3.46	□□□□□ -1.86
SKP2	P42843	YGR073C	YGR073C	372 nt		3.46	□□□□□ -1.86
SKP2	P42843	RPF1	YHR088W	888 nt		3.46	□□□□□ -1.86
SKP2	P42843	VMA5	YKL080W	1179 nt		3.46	□□□□□ -1.86
SKP2	P42843	SRP21	YKL122C	504 nt		3.46	□□□□□ -1.86
SKP2	P42843	YKT6	YKL196C	603 nt		3.46	□□□□□ -1.86
SKP2	P42843	RPL13B	YMR142C	600 nt		3.46	□□□□□ -1.86
SKP2	P42843	MSN1	YOL116W	1149 nt		3.46	□□□□□ -1.86
SKP2	P42843	RPC40	YPR110C	1008 nt		3.46	□□□□□ -1.86
SKP2	P42843	SHG1	YBR258C	429 nt		3.46	□□□□□ -1.86
SKP2	P42843	NDC80	YIL144W	2076 nt		3.46	□□□□□ -1.86
SKP2	P42843	CDC40	YDR364C	1368 nt		3.46	□□□□□ -1.86
SKP2	P42843	ASI3	YNL008C	2031 nt		3.46	□□□□□ -1.86
SKP2	P42843	REC8	YPR007C	2043 nt		3.46	□□□□□ -1.86
SKP2	P42843	NTO1	YPR031W	2247 nt		3.46	□□□□□ -1.86
SKP2	P42843	JJJ1	YNL227C	1773 nt		3.46	□□□□□ -1.86
SKP2	P42843	YTA7	YGR270W	4140 nt		3.45	□□□□□ -1.86
SKP2	P42843	POL4	YCR014C	1749 nt		3.45	□□□□□ -1.86
SKP2	P42843	YDR018C	YDR018C	1191 nt		3.45	□□□□□ -1.86
SKP2	P42843	SLD5	YDR489W	885 nt		3.45	□□□□□ -1.86
SKP2	P42843	MTC7	YEL033W	420 nt		3.45	□□□□□ -1.86
SKP2	P42843	NTF2	YER009W	378 nt		3.45	□□□□□ -1.86
SKP2	P42843	THG1	YGR024C	714 nt		3.45	□□□□□ -1.86
SKP2	P42843	RPS23A	YGR118W	438 nt		3.45	□□□□□ -1.86
SKP2	P42843	YHL026C	YHL026C	948 nt		3.45	□□□□□ -1.86

Retrieved 100 of 7,029 protein–RNA pairs in 18.2 ms