Protein–RNA interactions for Protein: P38931

SSN2, Mediator of RNA polymerase II transcription subunit 13, yeastyeast

Predictions only

Length 1,420 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSN2P38931 YBP1YBR216C 2025 nt2.36□□□□□ -2.03
SSN2P38931 ADR1YDR216W 3972 nt2.36□□□□□ -2.03
SSN2P38931 TVP15YDR100W 432 nt2.35□□□□□ -2.03
SSN2P38931 BUR6YER159C 429 nt2.35□□□□□ -2.03
SSN2P38931 YGL193CYGL193C 312 nt2.35□□□□□ -2.03
SSN2P38931 SOK1YDR006C 2706 nt2.35□□□□□ -2.03
SSN2P38931 YDR034C-DYDR034C-D 5313 nt2.35□□□□□ -2.03
SSN2P38931 YDR210W-BYDR210W-B 5313 nt2.35□□□□□ -2.03
SSN2P38931 YLR410W-BYLR410W-B 5313 nt2.35□□□□□ -2.03
SSN2P38931 COG4YPR105C 2586 nt2.35□□□□□ -2.03
SSN2P38931 MSH5YDL154W 2706 nt2.34□□□□□ -2.03
SSN2P38931 YLR416CYLR416C 399 nt2.34□□□□□ -2.03
SSN2P38931 RIX1YHR197W 2292 nt2.34□□□□□ -2.04
SSN2P38931 GSH2YOL049W 1476 nt2.34□□□□□ -2.04
SSN2P38931 KXD1YGL079W 657 nt2.34□□□□□ -2.04
SSN2P38931 RTT102YGR275W 474 nt2.34□□□□□ -2.04
SSN2P38931 MSH6YDR097C 3729 nt2.33□□□□□ -2.04
SSN2P38931 URC2YDR520C 2319 nt2.33□□□□□ -2.04
SSN2P38931 RGP1YDR137W 1992 nt2.33□□□□□ -2.04
SSN2P38931 PEX14YGL153W 1026 nt2.33□□□□□ -2.04
SSN2P38931 YKL165C-AYKL165C-A 234 nt2.33□□□□□ -2.04
SSN2P38931 RPS0BYLR048W 759 nt2.33□□□□□ -2.04
SSN2P38931 SEN15YMR059W 387 nt2.33□□□□□ -2.04
SSN2P38931 HAL1YPR005C 885 nt2.33□□□□□ -2.04
SSN2P38931 SWD3YBR175W 948 nt2.33□□□□□ -2.04
SSN2P38931 HSL1YKL101W 4557 nt2.32□□□□□ -2.04
SSN2P38931 SHE4YOR035C 2370 nt2.32□□□□□ -2.04
SSN2P38931 EPO1YMR124W 2832 nt2.32□□□□□ -2.04
SSN2P38931 YOL166CYOL166C 339 nt2.32□□□□□ -2.04
SSN2P38931 TCM62YBR044C 1719 nt2.31□□□□□ -2.04
SSN2P38931 CTM1YHR109W 1758 nt2.31□□□□□ -2.04
SSN2P38931 tQ(UUG)E2tQ(UUG)E2 72 nt2.31□□□□□ -2.04
SSN2P38931 CAB2YIL083C 1098 nt2.31□□□□□ -2.04
SSN2P38931 YIR014WYIR014W 729 nt2.31□□□□□ -2.04
SSN2P38931 RPS29AYLR388W 171 nt2.31□□□□□ -2.04
SSN2P38931 PKR1YMR123W 369 nt2.31□□□□□ -2.04
SSN2P38931 TPP1YMR156C 717 nt2.31□□□□□ -2.04
SSN2P38931 SRO9YCL037C 1305 nt2.31□□□□□ -2.04
SSN2P38931 NEL1YHR035W 1893 nt2.31□□□□□ -2.04
SSN2P38931 PDR8YLR266C 2106 nt2.3□□□□□ -2.04
SSN2P38931 RLI1YDR091C 1827 nt2.3□□□□□ -2.04
SSN2P38931 tH(GUG)E1tH(GUG)E1 72 nt2.3□□□□□ -2.04
SSN2P38931 tH(GUG)E2tH(GUG)E2 72 nt2.3□□□□□ -2.04
SSN2P38931 tH(GUG)G1tH(GUG)G1 72 nt2.3□□□□□ -2.04
SSN2P38931 tH(GUG)G2tH(GUG)G2 72 nt2.3□□□□□ -2.04
SSN2P38931 tH(GUG)HtH(GUG)H 72 nt2.3□□□□□ -2.04
SSN2P38931 tH(GUG)KtH(GUG)K 72 nt2.3□□□□□ -2.04
SSN2P38931 tH(GUG)MtH(GUG)M 72 nt2.3□□□□□ -2.04
SSN2P38931 RPL1BYGL135W 654 nt2.3□□□□□ -2.04
SSN2P38931 RPS1AYLR441C 768 nt2.3□□□□□ -2.04
SSN2P38931 RPL1AYPL220W 654 nt2.3□□□□□ -2.04
SSN2P38931 FIG2YCR089W 4830 nt2.3□□□□□ -2.04
SSN2P38931 PHO5YBR093C 1404 nt2.3□□□□□ -2.04
SSN2P38931 APL2YKL135C 2181 nt2.3□□□□□ -2.04
SSN2P38931 GGA1YDR358W 1674 nt2.3□□□□□ -2.04
SSN2P38931 MYO2YOR326W 4725 nt2.29□□□□□ -2.04
SSN2P38931 HMLALPHA1YCL066W 528 nt2.29□□□□□ -2.04
SSN2P38931 MATALPHA1YCR040W 528 nt2.29□□□□□ -2.04
SSN2P38931 RRP42YDL111C 798 nt2.29□□□□□ -2.04
SSN2P38931 WBP1YEL002C 1293 nt2.29□□□□□ -2.04
SSN2P38931 DDI2YFL061W 678 nt2.29□□□□□ -2.04
SSN2P38931 RRF1YHR038W 693 nt2.29□□□□□ -2.04
SSN2P38931 ARR2YPR200C 393 nt2.29□□□□□ -2.04
SSN2P38931 YBR238CYBR238C 2196 nt2.29□□□□□ -2.04
SSN2P38931 YDL041WYDL041W 354 nt2.28□□□□□ -2.04
SSN2P38931 YKR011CYKR011C 1062 nt2.28□□□□□ -2.04
SSN2P38931 CTF13YMR094W 1437 nt2.28□□□□□ -2.04
SSN2P38931 ALG11YNL048W 1647 nt2.27□□□□□ -2.05
SSN2P38931 SPH1YLR313C 1593 nt2.27□□□□□ -2.05
SSN2P38931 UBC6YER100W 753 nt2.27□□□□□ -2.05
SSN2P38931 SCL1YGL011C 759 nt2.27□□□□□ -2.05
SSN2P38931 COG2YGR120C 789 nt2.27□□□□□ -2.05
SSN2P38931 MGA2YIR033W 3342 nt2.26□□□□□ -2.05
SSN2P38931 PUF2YPR042C 3228 nt2.26□□□□□ -2.05
SSN2P38931 PAU2YEL049W 363 nt2.26□□□□□ -2.05
SSN2P38931 PAU12YGR294W 363 nt2.26□□□□□ -2.05
SSN2P38931 PAU18YLL064C 363 nt2.26□□□□□ -2.05
SSN2P38931 PAU6YNR076W 363 nt2.26□□□□□ -2.05
SSN2P38931 YBR255C-AYBR255C-A 363 nt2.26□□□□□ -2.05
SSN2P38931 PAU24YBR301W 363 nt2.26□□□□□ -2.05
SSN2P38931 YJL070CYJL070C 2667 nt2.26□□□□□ -2.05
SSN2P38931 TUS1YLR425W 3924 nt2.26□□□□□ -2.05
SSN2P38931 CLU1YMR012W 3834 nt2.26□□□□□ -2.05
SSN2P38931 BDP1YNL039W 1785 nt2.26□□□□□ -2.05
SSN2P38931 RPS25AYGR027C 327 nt2.25□□□□□ -2.05
SSN2P38931 INP1YMR204C 1263 nt2.25□□□□□ -2.05
SSN2P38931 SPC98YNL126W 2541 nt2.25□□□□□ -2.05
SSN2P38931 IRE1YHR079C 3348 nt2.25□□□□□ -2.05
SSN2P38931 DIA2YOR080W 2199 nt2.25□□□□□ -2.05
SSN2P38931 MED1YPR070W 1701 nt2.25□□□□□ -2.05
SSN2P38931 UBX3YDL091C 1368 nt2.25□□□□□ -2.05
SSN2P38931 YHR180W-AYHR180W-A 183 nt2.25□□□□□ -2.05
SSN2P38931 IME1YJR094C 1083 nt2.25□□□□□ -2.05
SSN2P38931 ERG29YMR134W 714 nt2.25□□□□□ -2.05
SSN2P38931 CYC2YOR037W 1101 nt2.25□□□□□ -2.05
SSN2P38931 UTP13YLR222C 2454 nt2.24□□□□□ -2.05
SSN2P38931 RGA2YDR379W 3030 nt2.24□□□□□ -2.05
SSN2P38931 ELG1YOR144C 2376 nt2.24□□□□□ -2.05
SSN2P38931 UBR1YGR184C 5853 nt2.24□□□□□ -2.05
SSN2P38931 PRP18YGR006W 756 nt2.24□□□□□ -2.05
Retrieved 100 of 7,029 protein–RNA pairs in 18.9 ms