Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LCN1P31025 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LCN1P31025 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.32■□□□□ 0.68
LCN1P31025 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.32■□□□□ 0.68
LCN1P31025 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.32■□□□□ 0.68
LCN1P31025 AC120498.10-201ENST00000621827 505 ntBASIC19.32■□□□□ 0.68
LCN1P31025 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.32■□□□□ 0.68
LCN1P31025 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LCN1P31025 AP004607.4-201ENST00000530158 1459 ntBASIC19.32■□□□□ 0.68
LCN1P31025 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LCN1P31025 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LCN1P31025 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
LCN1P31025 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LCN1P31025 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LCN1P31025 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
LCN1P31025 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.31■□□□□ 0.68
LCN1P31025 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LCN1P31025 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LCN1P31025 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.31■□□□□ 0.68
LCN1P31025 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.31■□□□□ 0.68
LCN1P31025 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
LCN1P31025 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LCN1P31025 KRT19P1-201ENST00000405746 1186 ntBASIC19.31■□□□□ 0.68
LCN1P31025 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.31■□□□□ 0.68
LCN1P31025 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.31■□□□□ 0.68
LCN1P31025 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
LCN1P31025 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.31■□□□□ 0.68
LCN1P31025 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LCN1P31025 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LCN1P31025 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LCN1P31025 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LCN1P31025 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LCN1P31025 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
LCN1P31025 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
LCN1P31025 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.3■□□□□ 0.68
LCN1P31025 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LCN1P31025 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LCN1P31025 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
LCN1P31025 KRT16P2-201ENST00000414673 1423 ntBASIC19.3■□□□□ 0.68
LCN1P31025 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LCN1P31025 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LCN1P31025 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.3■□□□□ 0.68
LCN1P31025 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LCN1P31025 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.29■□□□□ 0.68
LCN1P31025 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.29■□□□□ 0.68
LCN1P31025 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LCN1P31025 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LCN1P31025 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LCN1P31025 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LCN1P31025 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LCN1P31025 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LCN1P31025 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.29■□□□□ 0.68
LCN1P31025 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.29■□□□□ 0.68
LCN1P31025 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.29■□□□□ 0.68
LCN1P31025 AP001160.3-201ENST00000601484 763 ntBASIC19.29■□□□□ 0.68
LCN1P31025 AC104187.1-201ENST00000607510 612 ntBASIC19.29■□□□□ 0.68
LCN1P31025 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
LCN1P31025 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
LCN1P31025 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.28■□□□□ 0.68
LCN1P31025 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.28■□□□□ 0.68
LCN1P31025 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LCN1P31025 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LCN1P31025 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.28■□□□□ 0.68
LCN1P31025 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
LCN1P31025 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
LCN1P31025 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
LCN1P31025 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
LCN1P31025 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.28■□□□□ 0.68
LCN1P31025 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LCN1P31025 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LCN1P31025 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LCN1P31025 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.28■□□□□ 0.68
LCN1P31025 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LCN1P31025 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.28■□□□□ 0.68
LCN1P31025 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LCN1P31025 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LCN1P31025 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LCN1P31025 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
LCN1P31025 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LCN1P31025 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LCN1P31025 AC004854.2-201ENST00000608450 1441 ntBASIC19.27■□□□□ 0.68
LCN1P31025 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
LCN1P31025 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LCN1P31025 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
LCN1P31025 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
LCN1P31025 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.27■□□□□ 0.68
LCN1P31025 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
LCN1P31025 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LCN1P31025 AC026271.2-201ENST00000428091 497 ntBASIC19.27■□□□□ 0.68
LCN1P31025 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.27■□□□□ 0.68
LCN1P31025 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.27■□□□□ 0.68
LCN1P31025 RARRES2P6-201ENST00000567333 442 ntBASIC19.27■□□□□ 0.68
LCN1P31025 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.27■□□□□ 0.68
LCN1P31025 SLC7A5P1-201ENST00000568957 537 ntBASIC19.27■□□□□ 0.68
LCN1P31025 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.27■□□□□ 0.68
LCN1P31025 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.27■□□□□ 0.68
LCN1P31025 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LCN1P31025 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.27■□□□□ 0.68
LCN1P31025 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
LCN1P31025 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms