Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC25.41■■□□□ 1.66
COL4A5P29400 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC25.41■■□□□ 1.66
COL4A5P29400 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC25.41■■□□□ 1.66
COL4A5P29400 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
COL4A5P29400 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
COL4A5P29400 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
COL4A5P29400 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC25.4■■□□□ 1.66
COL4A5P29400 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC25.4■■□□□ 1.66
COL4A5P29400 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC25.4■■□□□ 1.66
COL4A5P29400 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
COL4A5P29400 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC25.4■■□□□ 1.66
COL4A5P29400 LINC01023-201ENST00000606054 436 ntBASIC25.4■■□□□ 1.66
COL4A5P29400 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC25.4■■□□□ 1.66
COL4A5P29400 C11orf96-202ENST00000528572 1834 ntBASIC25.4■■□□□ 1.66
COL4A5P29400 GCK-205ENST00000437084 1385 ntTSL 5 BASIC25.4■■□□□ 1.66
COL4A5P29400 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC25.4■■□□□ 1.66
COL4A5P29400 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC25.39■■□□□ 1.66
COL4A5P29400 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.66
COL4A5P29400 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC25.39■■□□□ 1.66
COL4A5P29400 AC012618.2-201ENST00000428058 849 ntBASIC25.39■■□□□ 1.66
COL4A5P29400 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC25.39■■□□□ 1.66
COL4A5P29400 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC25.39■■□□□ 1.66
COL4A5P29400 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC25.39■■□□□ 1.66
COL4A5P29400 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.66
COL4A5P29400 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC25.39■■□□□ 1.66
COL4A5P29400 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.66
COL4A5P29400 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC25.39■■□□□ 1.65
COL4A5P29400 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
COL4A5P29400 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
COL4A5P29400 TSPY7P-201ENST00000431358 1114 ntBASIC25.39■■□□□ 1.65
COL4A5P29400 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC25.39■■□□□ 1.65
COL4A5P29400 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC25.39■■□□□ 1.65
COL4A5P29400 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
COL4A5P29400 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC25.39■■□□□ 1.65
COL4A5P29400 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC25.39■■□□□ 1.65
COL4A5P29400 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC25.38■■□□□ 1.65
COL4A5P29400 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
COL4A5P29400 AC026471.6-201ENST00000622954 1905 ntBASIC25.38■■□□□ 1.65
COL4A5P29400 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC25.38■■□□□ 1.65
COL4A5P29400 OR2A1-AS1-207ENST00000486094 819 ntBASIC25.38■■□□□ 1.65
COL4A5P29400 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
COL4A5P29400 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC25.38■■□□□ 1.65
COL4A5P29400 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC25.38■■□□□ 1.65
COL4A5P29400 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC25.38■■□□□ 1.65
COL4A5P29400 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
COL4A5P29400 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC25.38■■□□□ 1.65
COL4A5P29400 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC25.38■■□□□ 1.65
COL4A5P29400 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
COL4A5P29400 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC25.37■■□□□ 1.65
COL4A5P29400 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
COL4A5P29400 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
COL4A5P29400 AC093323.1-202ENST00000635031 2045 ntBASIC25.37■■□□□ 1.65
COL4A5P29400 POM121L13P-201ENST00000422362 380 ntBASIC25.37■■□□□ 1.65
COL4A5P29400 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC25.37■■□□□ 1.65
COL4A5P29400 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
COL4A5P29400 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC25.37■■□□□ 1.65
COL4A5P29400 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC25.37■■□□□ 1.65
COL4A5P29400 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC25.37■■□□□ 1.65
COL4A5P29400 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
COL4A5P29400 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC25.37■■□□□ 1.65
COL4A5P29400 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC25.37■■□□□ 1.65
COL4A5P29400 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC25.37■■□□□ 1.65
COL4A5P29400 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
COL4A5P29400 MFF-205ENST00000354503 1085 ntTSL 2 BASIC25.36■■□□□ 1.65
COL4A5P29400 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
COL4A5P29400 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC25.36■■□□□ 1.65
COL4A5P29400 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC25.36■■□□□ 1.65
COL4A5P29400 KRT18P21-201ENST00000515767 1272 ntBASIC25.36■■□□□ 1.65
COL4A5P29400 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC25.36■■□□□ 1.65
COL4A5P29400 REXO1L12P-201ENST00000622156 912 ntBASIC25.36■■□□□ 1.65
COL4A5P29400 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC25.36■■□□□ 1.65
COL4A5P29400 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC25.36■■□□□ 1.65
COL4A5P29400 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
COL4A5P29400 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
COL4A5P29400 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC25.36■■□□□ 1.65
COL4A5P29400 COMT-203ENST00000403184 2217 ntTSL 2 BASIC25.36■■□□□ 1.65
COL4A5P29400 SERF2-207ENST00000409614 582 ntTSL 2 BASIC25.36■■□□□ 1.65
COL4A5P29400 AC245052.3-201ENST00000450182 901 ntBASIC25.36■■□□□ 1.65
COL4A5P29400 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC25.36■■□□□ 1.65
COL4A5P29400 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
COL4A5P29400 AC233702.5-201ENST00000584107 538 ntBASIC25.36■■□□□ 1.65
COL4A5P29400 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC25.36■■□□□ 1.65
COL4A5P29400 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
COL4A5P29400 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC25.35■■□□□ 1.65
COL4A5P29400 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
COL4A5P29400 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
COL4A5P29400 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
COL4A5P29400 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
COL4A5P29400 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC25.35■■□□□ 1.65
COL4A5P29400 CDV3P1-201ENST00000471403 739 ntBASIC25.35■■□□□ 1.65
COL4A5P29400 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC25.35■■□□□ 1.65
COL4A5P29400 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC25.35■■□□□ 1.65
COL4A5P29400 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
COL4A5P29400 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC25.35■■□□□ 1.65
COL4A5P29400 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
COL4A5P29400 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
COL4A5P29400 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
COL4A5P29400 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
COL4A5P29400 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
COL4A5P29400 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms