Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LMO1P25800 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LMO1P25800 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
LMO1P25800 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.56■□□□□ 0.4
LMO1P25800 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LMO1P25800 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LMO1P25800 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.56■□□□□ 0.4
LMO1P25800 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LMO1P25800 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LMO1P25800 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LMO1P25800 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LMO1P25800 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LMO1P25800 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
LMO1P25800 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
LMO1P25800 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
LMO1P25800 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
LMO1P25800 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LMO1P25800 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
LMO1P25800 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LMO1P25800 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LMO1P25800 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LMO1P25800 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.55■□□□□ 0.4
LMO1P25800 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC17.55■□□□□ 0.4
LMO1P25800 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.55■□□□□ 0.4
LMO1P25800 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC17.55■□□□□ 0.4
LMO1P25800 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.55■□□□□ 0.4
LMO1P25800 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LMO1P25800 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
LMO1P25800 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LMO1P25800 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LMO1P25800 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LMO1P25800 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LMO1P25800 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
LMO1P25800 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.54■□□□□ 0.4
LMO1P25800 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
LMO1P25800 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LMO1P25800 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.54■□□□□ 0.4
LMO1P25800 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.54■□□□□ 0.4
LMO1P25800 AC007952.6-201ENST00000573168 2673 ntBASIC17.54■□□□□ 0.4
LMO1P25800 AC003957.1-201ENST00000625108 2673 ntBASIC17.54■□□□□ 0.4
LMO1P25800 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LMO1P25800 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.54■□□□□ 0.4
LMO1P25800 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
LMO1P25800 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LMO1P25800 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LMO1P25800 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
LMO1P25800 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LMO1P25800 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LMO1P25800 KRT87P-202ENST00000534226 1464 ntBASIC17.53■□□□□ 0.4
LMO1P25800 JTB-203ENST00000368589 1216 ntTSL 2 BASIC17.53■□□□□ 0.4
LMO1P25800 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LMO1P25800 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.53■□□□□ 0.4
LMO1P25800 AC123595.1-201ENST00000440769 1046 ntBASIC17.53■□□□□ 0.4
LMO1P25800 AC079140.4-201ENST00000507448 529 ntBASIC17.53■□□□□ 0.4
LMO1P25800 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
LMO1P25800 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.53■□□□□ 0.4
LMO1P25800 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LMO1P25800 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LMO1P25800 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LMO1P25800 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LMO1P25800 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.53■□□□□ 0.4
LMO1P25800 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
LMO1P25800 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC17.53■□□□□ 0.4
LMO1P25800 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.53■□□□□ 0.4
LMO1P25800 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
LMO1P25800 LINC02228-203ENST00000641970 1355 ntBASIC17.53■□□□□ 0.4
LMO1P25800 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LMO1P25800 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
LMO1P25800 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LMO1P25800 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LMO1P25800 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
LMO1P25800 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LMO1P25800 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
LMO1P25800 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
LMO1P25800 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
LMO1P25800 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC17.52■□□□□ 0.4
LMO1P25800 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LMO1P25800 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
LMO1P25800 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LMO1P25800 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LMO1P25800 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LMO1P25800 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.51■□□□□ 0.39
LMO1P25800 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LMO1P25800 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LMO1P25800 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LMO1P25800 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.51■□□□□ 0.39
LMO1P25800 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LMO1P25800 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
LMO1P25800 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LMO1P25800 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LMO1P25800 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.51■□□□□ 0.39
LMO1P25800 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
LMO1P25800 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
LMO1P25800 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
LMO1P25800 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
LMO1P25800 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LMO1P25800 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC17.5■□□□□ 0.39
LMO1P25800 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.5■□□□□ 0.39
LMO1P25800 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LMO1P25800 POU5F1P4-201ENST00000413175 1085 ntBASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms