Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MMP11P24347 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MMP11P24347 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
MMP11P24347 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MMP11P24347 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MMP11P24347 GPX1P1-201ENST00000388829 606 ntBASIC19.85■□□□□ 0.77
MMP11P24347 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.85■□□□□ 0.77
MMP11P24347 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.85■□□□□ 0.77
MMP11P24347 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.85■□□□□ 0.77
MMP11P24347 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.85■□□□□ 0.77
MMP11P24347 AC010536.3-201ENST00000620306 533 ntBASIC19.85■□□□□ 0.77
MMP11P24347 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MMP11P24347 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.85■□□□□ 0.77
MMP11P24347 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
MMP11P24347 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.85■□□□□ 0.77
MMP11P24347 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
MMP11P24347 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.84■□□□□ 0.77
MMP11P24347 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
MMP11P24347 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
MMP11P24347 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MMP11P24347 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
MMP11P24347 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.84■□□□□ 0.77
MMP11P24347 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.84■□□□□ 0.77
MMP11P24347 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.84■□□□□ 0.77
MMP11P24347 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.84■□□□□ 0.77
MMP11P24347 AC005181.1-201ENST00000604782 1256 ntBASIC19.84■□□□□ 0.77
MMP11P24347 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.84■□□□□ 0.77
MMP11P24347 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MMP11P24347 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
MMP11P24347 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
MMP11P24347 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
MMP11P24347 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.84■□□□□ 0.77
MMP11P24347 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
MMP11P24347 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MMP11P24347 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MMP11P24347 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MMP11P24347 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.83■□□□□ 0.77
MMP11P24347 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
MMP11P24347 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
MMP11P24347 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MMP11P24347 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
MMP11P24347 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
MMP11P24347 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.83■□□□□ 0.77
MMP11P24347 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.83■□□□□ 0.77
MMP11P24347 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.83■□□□□ 0.76
MMP11P24347 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.83■□□□□ 0.76
MMP11P24347 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.83■□□□□ 0.76
MMP11P24347 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
MMP11P24347 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.83■□□□□ 0.76
MMP11P24347 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
MMP11P24347 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.83■□□□□ 0.76
MMP11P24347 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
MMP11P24347 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MMP11P24347 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MMP11P24347 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.82■□□□□ 0.76
MMP11P24347 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MMP11P24347 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
MMP11P24347 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MMP11P24347 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
MMP11P24347 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.82■□□□□ 0.76
MMP11P24347 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.82■□□□□ 0.76
MMP11P24347 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.82■□□□□ 0.76
MMP11P24347 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.82■□□□□ 0.76
MMP11P24347 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.82■□□□□ 0.76
MMP11P24347 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.82■□□□□ 0.76
MMP11P24347 AL121832.2-201ENST00000610979 668 ntBASIC19.82■□□□□ 0.76
MMP11P24347 AC008175.2-201ENST00000612840 297 ntBASIC19.82■□□□□ 0.76
MMP11P24347 AL050303.2-201ENST00000619798 666 ntBASIC19.82■□□□□ 0.76
MMP11P24347 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
MMP11P24347 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MMP11P24347 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
MMP11P24347 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
MMP11P24347 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
MMP11P24347 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.82■□□□□ 0.76
MMP11P24347 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.82■□□□□ 0.76
MMP11P24347 AC244015.2-201ENST00000616358 1861 ntBASIC19.82■□□□□ 0.76
MMP11P24347 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
MMP11P24347 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MMP11P24347 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
MMP11P24347 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MMP11P24347 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
MMP11P24347 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MMP11P24347 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MMP11P24347 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MMP11P24347 CNN2P6-201ENST00000439038 900 ntBASIC19.81■□□□□ 0.76
MMP11P24347 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
MMP11P24347 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.81■□□□□ 0.76
MMP11P24347 AC120498.10-201ENST00000621827 505 ntBASIC19.81■□□□□ 0.76
MMP11P24347 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MMP11P24347 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MMP11P24347 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MMP11P24347 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.81■□□□□ 0.76
MMP11P24347 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MMP11P24347 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
MMP11P24347 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MMP11P24347 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MMP11P24347 AL355802.2-201ENST00000402069 882 ntBASIC19.8■□□□□ 0.76
MMP11P24347 SLC7A5P2-201ENST00000553010 536 ntBASIC19.8■□□□□ 0.76
MMP11P24347 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.8■□□□□ 0.76
MMP11P24347 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms