Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CAPN3P20807 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.08■□□□□ 0.81
CAPN3P20807 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.08■□□□□ 0.81
CAPN3P20807 AC090192.1-201ENST00000517740 490 ntBASIC20.08■□□□□ 0.81
CAPN3P20807 AP005435.1-201ENST00000529293 1178 ntBASIC20.08■□□□□ 0.81
CAPN3P20807 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.08■□□□□ 0.81
CAPN3P20807 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.08■□□□□ 0.81
CAPN3P20807 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CAPN3P20807 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CAPN3P20807 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CAPN3P20807 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.08■□□□□ 0.8
CAPN3P20807 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.08■□□□□ 0.8
CAPN3P20807 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.08■□□□□ 0.8
CAPN3P20807 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CAPN3P20807 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.07■□□□□ 0.8
CAPN3P20807 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
CAPN3P20807 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CAPN3P20807 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CAPN3P20807 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CAPN3P20807 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CAPN3P20807 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.07■□□□□ 0.8
CAPN3P20807 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CAPN3P20807 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.07■□□□□ 0.8
CAPN3P20807 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.07■□□□□ 0.8
CAPN3P20807 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.07■□□□□ 0.8
CAPN3P20807 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CAPN3P20807 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CAPN3P20807 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.07■□□□□ 0.8
CAPN3P20807 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CAPN3P20807 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CAPN3P20807 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CAPN3P20807 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.06■□□□□ 0.8
CAPN3P20807 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.06■□□□□ 0.8
CAPN3P20807 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CAPN3P20807 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CAPN3P20807 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
CAPN3P20807 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CAPN3P20807 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CAPN3P20807 IRS3P-201ENST00000223076 1006 ntBASIC20.06■□□□□ 0.8
CAPN3P20807 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CAPN3P20807 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CAPN3P20807 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CAPN3P20807 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CAPN3P20807 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
CAPN3P20807 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CAPN3P20807 AL138724.1-201ENST00000606771 1088 ntBASIC20.06■□□□□ 0.8
CAPN3P20807 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
CAPN3P20807 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CAPN3P20807 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CAPN3P20807 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CAPN3P20807 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CAPN3P20807 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CAPN3P20807 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.05■□□□□ 0.8
CAPN3P20807 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CAPN3P20807 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CAPN3P20807 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CAPN3P20807 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
CAPN3P20807 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.05■□□□□ 0.8
CAPN3P20807 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CAPN3P20807 SYT6-210ENST00000641643 1587 ntBASIC20.05■□□□□ 0.8
CAPN3P20807 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CAPN3P20807 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CAPN3P20807 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
CAPN3P20807 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.05■□□□□ 0.8
CAPN3P20807 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CAPN3P20807 AC136469.2-201ENST00000623944 1028 ntBASIC20.05■□□□□ 0.8
CAPN3P20807 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
CAPN3P20807 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CAPN3P20807 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
CAPN3P20807 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CAPN3P20807 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.05■□□□□ 0.8
CAPN3P20807 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CAPN3P20807 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CAPN3P20807 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.05■□□□□ 0.8
CAPN3P20807 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CAPN3P20807 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CAPN3P20807 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CAPN3P20807 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.04■□□□□ 0.8
CAPN3P20807 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CAPN3P20807 AC027682.1-201ENST00000562846 899 ntBASIC20.04■□□□□ 0.8
CAPN3P20807 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CAPN3P20807 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.04■□□□□ 0.8
CAPN3P20807 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CAPN3P20807 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CAPN3P20807 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.04■□□□□ 0.8
CAPN3P20807 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CAPN3P20807 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.03■□□□□ 0.8
CAPN3P20807 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CAPN3P20807 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CAPN3P20807 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CAPN3P20807 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CAPN3P20807 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CAPN3P20807 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CAPN3P20807 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CAPN3P20807 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CAPN3P20807 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.03■□□□□ 0.8
CAPN3P20807 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.03■□□□□ 0.8
CAPN3P20807 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
CAPN3P20807 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CAPN3P20807 AL391422.3-201ENST00000603791 2761 ntBASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms