Protein–RNA interactions for Protein: P16452

EPB42, Erythrocyte membrane protein band 4.2, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42P16452 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
EPB42P16452 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
EPB42P16452 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
EPB42P16452 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
EPB42P16452 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
EPB42P16452 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
EPB42P16452 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
EPB42P16452 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
EPB42P16452 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
EPB42P16452 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
EPB42P16452 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
EPB42P16452 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
EPB42P16452 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
EPB42P16452 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.32■□□□□ 0.84
EPB42P16452 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.32■□□□□ 0.84
EPB42P16452 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
EPB42P16452 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
EPB42P16452 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
EPB42P16452 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
EPB42P16452 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
EPB42P16452 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
EPB42P16452 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
EPB42P16452 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
EPB42P16452 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
EPB42P16452 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
EPB42P16452 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.31■□□□□ 0.84
EPB42P16452 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
EPB42P16452 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
EPB42P16452 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.31■□□□□ 0.84
EPB42P16452 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
EPB42P16452 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
EPB42P16452 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
EPB42P16452 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.31■□□□□ 0.84
EPB42P16452 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.31■□□□□ 0.84
EPB42P16452 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
EPB42P16452 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
EPB42P16452 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
EPB42P16452 AC027612.3-201ENST00000413684 1047 ntBASIC20.31■□□□□ 0.84
EPB42P16452 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
EPB42P16452 AC079140.4-201ENST00000507448 529 ntBASIC20.31■□□□□ 0.84
EPB42P16452 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.31■□□□□ 0.84
EPB42P16452 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.31■□□□□ 0.84
EPB42P16452 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
EPB42P16452 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
EPB42P16452 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
EPB42P16452 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
EPB42P16452 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
EPB42P16452 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EPB42P16452 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
EPB42P16452 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EPB42P16452 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EPB42P16452 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EPB42P16452 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
EPB42P16452 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
EPB42P16452 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
EPB42P16452 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EPB42P16452 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
EPB42P16452 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
EPB42P16452 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.3■□□□□ 0.84
EPB42P16452 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.3■□□□□ 0.84
EPB42P16452 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
EPB42P16452 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.3■□□□□ 0.84
EPB42P16452 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
EPB42P16452 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
EPB42P16452 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
EPB42P16452 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
EPB42P16452 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EPB42P16452 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.3■□□□□ 0.84
EPB42P16452 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EPB42P16452 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EPB42P16452 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EPB42P16452 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
EPB42P16452 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
EPB42P16452 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
EPB42P16452 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EPB42P16452 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
EPB42P16452 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EPB42P16452 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.29■□□□□ 0.84
EPB42P16452 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
EPB42P16452 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EPB42P16452 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
EPB42P16452 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.29■□□□□ 0.84
EPB42P16452 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.29■□□□□ 0.84
EPB42P16452 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.29■□□□□ 0.84
EPB42P16452 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.29■□□□□ 0.84
EPB42P16452 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
EPB42P16452 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.29■□□□□ 0.84
EPB42P16452 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
EPB42P16452 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EPB42P16452 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.29■□□□□ 0.84
EPB42P16452 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
EPB42P16452 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
EPB42P16452 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.28■□□□□ 0.84
EPB42P16452 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.28■□□□□ 0.84
EPB42P16452 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.28■□□□□ 0.84
EPB42P16452 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
EPB42P16452 KRT87P-202ENST00000534226 1464 ntBASIC20.28■□□□□ 0.84
EPB42P16452 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
EPB42P16452 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.28■□□□□ 0.84
EPB42P16452 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms