Protein–RNA interactions for Protein: P16403

HIST1H1C, Histone H1.2, humanhuman

Known RBP Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1CP16403 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HIST1H1CP16403 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
HIST1H1CP16403 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HIST1H1CP16403 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
HIST1H1CP16403 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
HIST1H1CP16403 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HIST1H1CP16403 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.75■□□□□ 0.59
HIST1H1CP16403 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.75■□□□□ 0.59
HIST1H1CP16403 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HIST1H1CP16403 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.75■□□□□ 0.59
HIST1H1CP16403 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HIST1H1CP16403 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
HIST1H1CP16403 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HIST1H1CP16403 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
HIST1H1CP16403 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
HIST1H1CP16403 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HIST1H1CP16403 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.74■□□□□ 0.59
HIST1H1CP16403 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HIST1H1CP16403 MIR572-201ENST00000384983 95 ntBASIC18.74■□□□□ 0.59
HIST1H1CP16403 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.74■□□□□ 0.59
HIST1H1CP16403 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.74■□□□□ 0.59
HIST1H1CP16403 AL355001.2-201ENST00000620617 1191 ntBASIC18.74■□□□□ 0.59
HIST1H1CP16403 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.74■□□□□ 0.59
HIST1H1CP16403 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HIST1H1CP16403 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.74■□□□□ 0.59
HIST1H1CP16403 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
HIST1H1CP16403 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HIST1H1CP16403 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HIST1H1CP16403 AC092667.1-201ENST00000434301 2586 ntBASIC18.73■□□□□ 0.59
HIST1H1CP16403 RASA4CP-201ENST00000424092 1398 ntBASIC18.73■□□□□ 0.59
HIST1H1CP16403 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HIST1H1CP16403 AF213884.3-201ENST00000563833 479 ntBASIC18.73■□□□□ 0.59
HIST1H1CP16403 AC110285.6-201ENST00000617652 491 ntBASIC18.73■□□□□ 0.59
HIST1H1CP16403 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HIST1H1CP16403 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HIST1H1CP16403 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HIST1H1CP16403 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
HIST1H1CP16403 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HIST1H1CP16403 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
HIST1H1CP16403 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
HIST1H1CP16403 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HIST1H1CP16403 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.72■□□□□ 0.59
HIST1H1CP16403 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HIST1H1CP16403 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.72■□□□□ 0.59
HIST1H1CP16403 AC121338.2-201ENST00000622535 1744 ntBASIC18.72■□□□□ 0.59
HIST1H1CP16403 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.72■□□□□ 0.59
HIST1H1CP16403 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HIST1H1CP16403 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HIST1H1CP16403 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
HIST1H1CP16403 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.72■□□□□ 0.59
HIST1H1CP16403 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.72■□□□□ 0.59
HIST1H1CP16403 MIR939-201ENST00000401314 82 ntBASIC18.72■□□□□ 0.59
HIST1H1CP16403 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.72■□□□□ 0.59
HIST1H1CP16403 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.72■□□□□ 0.59
HIST1H1CP16403 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.72■□□□□ 0.59
HIST1H1CP16403 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.72■□□□□ 0.59
HIST1H1CP16403 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
HIST1H1CP16403 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HIST1H1CP16403 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.72■□□□□ 0.59
HIST1H1CP16403 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HIST1H1CP16403 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.72■□□□□ 0.59
HIST1H1CP16403 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HIST1H1CP16403 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
HIST1H1CP16403 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.71■□□□□ 0.59
HIST1H1CP16403 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HIST1H1CP16403 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
HIST1H1CP16403 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HIST1H1CP16403 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
HIST1H1CP16403 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HIST1H1CP16403 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HIST1H1CP16403 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HIST1H1CP16403 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
HIST1H1CP16403 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
HIST1H1CP16403 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
HIST1H1CP16403 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HIST1H1CP16403 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HIST1H1CP16403 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.71■□□□□ 0.59
HIST1H1CP16403 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.71■□□□□ 0.59
HIST1H1CP16403 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HIST1H1CP16403 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
HIST1H1CP16403 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
HIST1H1CP16403 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
HIST1H1CP16403 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
HIST1H1CP16403 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HIST1H1CP16403 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
HIST1H1CP16403 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.58
HIST1H1CP16403 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.7■□□□□ 0.58
HIST1H1CP16403 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HIST1H1CP16403 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HIST1H1CP16403 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.7■□□□□ 0.58
HIST1H1CP16403 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
HIST1H1CP16403 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.7■□□□□ 0.58
HIST1H1CP16403 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HIST1H1CP16403 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.7■□□□□ 0.58
HIST1H1CP16403 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HIST1H1CP16403 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
HIST1H1CP16403 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HIST1H1CP16403 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
HIST1H1CP16403 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HIST1H1CP16403 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms