Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC17.71■□□□□ 0.43
HIST1H1DP16402 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC17.71■□□□□ 0.43
HIST1H1DP16402 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HIST1H1DP16402 GRAMD4P7-201ENST00000578182 1232 ntBASIC17.71■□□□□ 0.43
HIST1H1DP16402 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC17.71■□□□□ 0.43
HIST1H1DP16402 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
HIST1H1DP16402 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
HIST1H1DP16402 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HIST1H1DP16402 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
HIST1H1DP16402 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
HIST1H1DP16402 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.42
HIST1H1DP16402 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.42
HIST1H1DP16402 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HIST1H1DP16402 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC17.7■□□□□ 0.42
HIST1H1DP16402 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HIST1H1DP16402 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HIST1H1DP16402 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HIST1H1DP16402 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC17.7■□□□□ 0.42
HIST1H1DP16402 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HIST1H1DP16402 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HIST1H1DP16402 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HIST1H1DP16402 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
HIST1H1DP16402 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HIST1H1DP16402 GUSBP5-201ENST00000418136 578 ntBASIC17.7■□□□□ 0.42
HIST1H1DP16402 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
HIST1H1DP16402 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
HIST1H1DP16402 AC027702.1-201ENST00000563810 1770 ntBASIC17.7■□□□□ 0.42
HIST1H1DP16402 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HIST1H1DP16402 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HIST1H1DP16402 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HIST1H1DP16402 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
HIST1H1DP16402 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HIST1H1DP16402 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17.7■□□□□ 0.42
HIST1H1DP16402 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
HIST1H1DP16402 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
HIST1H1DP16402 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HIST1H1DP16402 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.69■□□□□ 0.42
HIST1H1DP16402 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HIST1H1DP16402 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
HIST1H1DP16402 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
HIST1H1DP16402 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HIST1H1DP16402 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.69■□□□□ 0.42
HIST1H1DP16402 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC17.69■□□□□ 0.42
HIST1H1DP16402 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HIST1H1DP16402 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HIST1H1DP16402 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC17.69■□□□□ 0.42
HIST1H1DP16402 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HIST1H1DP16402 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
HIST1H1DP16402 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HIST1H1DP16402 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.69■□□□□ 0.42
HIST1H1DP16402 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HIST1H1DP16402 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
HIST1H1DP16402 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
HIST1H1DP16402 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIST1H1DP16402 AC007225.1-201ENST00000566331 1836 ntBASIC17.68■□□□□ 0.42
HIST1H1DP16402 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIST1H1DP16402 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIST1H1DP16402 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HIST1H1DP16402 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIST1H1DP16402 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIST1H1DP16402 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIST1H1DP16402 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIST1H1DP16402 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIST1H1DP16402 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIST1H1DP16402 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HIST1H1DP16402 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.68■□□□□ 0.42
HIST1H1DP16402 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.68■□□□□ 0.42
HIST1H1DP16402 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
HIST1H1DP16402 SMUG1P1-201ENST00000590640 811 ntBASIC17.68■□□□□ 0.42
HIST1H1DP16402 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.68■□□□□ 0.42
HIST1H1DP16402 AL035685.1-201ENST00000636663 812 ntBASIC17.68■□□□□ 0.42
HIST1H1DP16402 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIST1H1DP16402 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIST1H1DP16402 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIST1H1DP16402 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HIST1H1DP16402 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
HIST1H1DP16402 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.67■□□□□ 0.42
HIST1H1DP16402 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC17.67■□□□□ 0.42
HIST1H1DP16402 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HIST1H1DP16402 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HIST1H1DP16402 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
HIST1H1DP16402 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.67■□□□□ 0.42
HIST1H1DP16402 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HIST1H1DP16402 AC020907.5-201ENST00000624372 1936 ntBASIC17.67■□□□□ 0.42
HIST1H1DP16402 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HIST1H1DP16402 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
HIST1H1DP16402 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HIST1H1DP16402 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
HIST1H1DP16402 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.67■□□□□ 0.42
HIST1H1DP16402 SNX3-202ENST00000349379 890 ntTSL 2 BASIC17.67■□□□□ 0.42
HIST1H1DP16402 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.67■□□□□ 0.42
HIST1H1DP16402 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HIST1H1DP16402 SF1-220ENST00000626028 704 ntTSL 2 BASIC17.67■□□□□ 0.42
HIST1H1DP16402 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.67■□□□□ 0.42
HIST1H1DP16402 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
HIST1H1DP16402 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HIST1H1DP16402 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HIST1H1DP16402 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
HIST1H1DP16402 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.67■□□□□ 0.42
HIST1H1DP16402 AL391422.3-201ENST00000603791 2761 ntBASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms