Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PF4V1P10720 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC16.53■□□□□ 0.24
PF4V1P10720 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PF4V1P10720 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
PF4V1P10720 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
PF4V1P10720 STK25-234ENST00000535007 2459 ntTSL 2 BASIC16.53■□□□□ 0.24
PF4V1P10720 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
PF4V1P10720 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PF4V1P10720 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
PF4V1P10720 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PF4V1P10720 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC16.53■□□□□ 0.24
PF4V1P10720 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC16.53■□□□□ 0.24
PF4V1P10720 MFSD11-216ENST00000590393 1141 ntBASIC16.53■□□□□ 0.24
PF4V1P10720 AC053503.5-201ENST00000601508 636 ntBASIC16.53■□□□□ 0.24
PF4V1P10720 UBE2DNL-204ENST00000602536 740 ntBASIC16.53■□□□□ 0.24
PF4V1P10720 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PF4V1P10720 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PF4V1P10720 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PF4V1P10720 ME2-206ENST00000638410 2289 ntTSL 5 BASIC16.53■□□□□ 0.24
PF4V1P10720 ME2-210ENST00000639255 2262 ntTSL 5 BASIC16.53■□□□□ 0.24
PF4V1P10720 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PF4V1P10720 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PF4V1P10720 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC16.52■□□□□ 0.24
PF4V1P10720 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
PF4V1P10720 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
PF4V1P10720 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PF4V1P10720 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PF4V1P10720 AC007322.1-201ENST00000426983 750 ntBASIC16.52■□□□□ 0.24
PF4V1P10720 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC16.52■□□□□ 0.24
PF4V1P10720 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC16.52■□□□□ 0.24
PF4V1P10720 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC16.52■□□□□ 0.24
PF4V1P10720 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC16.52■□□□□ 0.24
PF4V1P10720 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC16.52■□□□□ 0.24
PF4V1P10720 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.52■□□□□ 0.24
PF4V1P10720 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PF4V1P10720 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PF4V1P10720 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PF4V1P10720 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC16.52■□□□□ 0.23
PF4V1P10720 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC16.51■□□□□ 0.23
PF4V1P10720 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PF4V1P10720 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PF4V1P10720 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PF4V1P10720 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
PF4V1P10720 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PF4V1P10720 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PF4V1P10720 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC16.51■□□□□ 0.23
PF4V1P10720 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PF4V1P10720 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
PF4V1P10720 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
PF4V1P10720 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC16.51■□□□□ 0.23
PF4V1P10720 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PF4V1P10720 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
PF4V1P10720 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
PF4V1P10720 MAP2K4P1-201ENST00000438453 1195 ntBASIC16.51■□□□□ 0.23
PF4V1P10720 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PF4V1P10720 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC16.51■□□□□ 0.23
PF4V1P10720 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC16.51■□□□□ 0.23
PF4V1P10720 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC16.51■□□□□ 0.23
PF4V1P10720 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PF4V1P10720 EEF1DP3-203ENST00000566025 782 ntBASIC16.51■□□□□ 0.23
PF4V1P10720 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PF4V1P10720 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
PF4V1P10720 AC008175.2-201ENST00000612840 297 ntBASIC16.51■□□□□ 0.23
PF4V1P10720 MYCNOS-205ENST00000641950 531 ntBASIC16.51■□□□□ 0.23
PF4V1P10720 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PF4V1P10720 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PF4V1P10720 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PF4V1P10720 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC16.51■□□□□ 0.23
PF4V1P10720 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
PF4V1P10720 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC16.51■□□□□ 0.23
PF4V1P10720 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PF4V1P10720 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PF4V1P10720 RARG-204ENST00000543726 1779 ntTSL 2 BASIC16.51■□□□□ 0.23
PF4V1P10720 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PF4V1P10720 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PF4V1P10720 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PF4V1P10720 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PF4V1P10720 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PF4V1P10720 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PF4V1P10720 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PF4V1P10720 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PF4V1P10720 NCF1B-203ENST00000435988 1254 ntBASIC16.5■□□□□ 0.23
PF4V1P10720 RNF146-206ENST00000480444 843 ntTSL 2 BASIC16.5■□□□□ 0.23
PF4V1P10720 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC16.5■□□□□ 0.23
PF4V1P10720 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PF4V1P10720 AC138907.5-202ENST00000569484 235 ntBASIC16.5■□□□□ 0.23
PF4V1P10720 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PF4V1P10720 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC16.5■□□□□ 0.23
PF4V1P10720 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC16.5■□□□□ 0.23
PF4V1P10720 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PF4V1P10720 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PF4V1P10720 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC16.5■□□□□ 0.23
PF4V1P10720 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PF4V1P10720 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PF4V1P10720 FBXW4P1-201ENST00000426721 2239 ntBASIC16.5■□□□□ 0.23
PF4V1P10720 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
PF4V1P10720 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC16.5■□□□□ 0.23
PF4V1P10720 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PF4V1P10720 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC16.49■□□□□ 0.23
PF4V1P10720 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms