Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RARAP10276 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.93■■□□□ 1.1
RARAP10276 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.93■■□□□ 1.1
RARAP10276 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RARAP10276 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RARAP10276 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.92■■□□□ 1.1
RARAP10276 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RARAP10276 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RARAP10276 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RARAP10276 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RARAP10276 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RARAP10276 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RARAP10276 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RARAP10276 AC027612.3-201ENST00000413684 1047 ntBASIC21.92■■□□□ 1.1
RARAP10276 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RARAP10276 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RARAP10276 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
RARAP10276 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RARAP10276 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.92■■□□□ 1.1
RARAP10276 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RARAP10276 LINC01006-201ENST00000333319 2292 ntBASIC21.91■■□□□ 1.1
RARAP10276 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.91■■□□□ 1.1
RARAP10276 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RARAP10276 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RARAP10276 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
RARAP10276 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
RARAP10276 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.91■■□□□ 1.1
RARAP10276 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RARAP10276 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RARAP10276 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
RARAP10276 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RARAP10276 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RARAP10276 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.91■■□□□ 1.1
RARAP10276 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.91■■□□□ 1.1
RARAP10276 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
RARAP10276 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RARAP10276 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RARAP10276 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.9■■□□□ 1.1
RARAP10276 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RARAP10276 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RARAP10276 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RARAP10276 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.9■■□□□ 1.1
RARAP10276 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.9■■□□□ 1.1
RARAP10276 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RARAP10276 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RARAP10276 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.9■■□□□ 1.1
RARAP10276 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RARAP10276 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RARAP10276 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.9■■□□□ 1.1
RARAP10276 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.9■■□□□ 1.1
RARAP10276 FEM1AP1-201ENST00000431297 1995 ntBASIC21.9■■□□□ 1.1
RARAP10276 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RARAP10276 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.9■■□□□ 1.1
RARAP10276 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
RARAP10276 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RARAP10276 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RARAP10276 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.89■■□□□ 1.1
RARAP10276 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
RARAP10276 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
RARAP10276 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
RARAP10276 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
RARAP10276 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.09
RARAP10276 ZNRF2P3-201ENST00000424200 374 ntBASIC21.89■■□□□ 1.09
RARAP10276 EEF1DP3-203ENST00000566025 782 ntBASIC21.89■■□□□ 1.09
RARAP10276 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.89■■□□□ 1.09
RARAP10276 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.89■■□□□ 1.09
RARAP10276 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.89■■□□□ 1.09
RARAP10276 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RARAP10276 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
RARAP10276 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
RARAP10276 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RARAP10276 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
RARAP10276 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RARAP10276 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RARAP10276 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
RARAP10276 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.88■■□□□ 1.09
RARAP10276 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RARAP10276 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
RARAP10276 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
RARAP10276 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RARAP10276 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RARAP10276 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.88■■□□□ 1.09
RARAP10276 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RARAP10276 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RARAP10276 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.88■■□□□ 1.09
RARAP10276 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.88■■□□□ 1.09
RARAP10276 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
RARAP10276 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
RARAP10276 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RARAP10276 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RARAP10276 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RARAP10276 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
RARAP10276 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RARAP10276 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.87■■□□□ 1.09
RARAP10276 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.87■■□□□ 1.09
RARAP10276 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RARAP10276 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
RARAP10276 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RARAP10276 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RARAP10276 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms