Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.47■□□□□ 0.55
ERCC1P07992 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
ERCC1P07992 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ERCC1P07992 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.47■□□□□ 0.55
ERCC1P07992 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ERCC1P07992 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
ERCC1P07992 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.47■□□□□ 0.55
ERCC1P07992 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ERCC1P07992 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ERCC1P07992 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
ERCC1P07992 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.46■□□□□ 0.55
ERCC1P07992 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.46■□□□□ 0.55
ERCC1P07992 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.46■□□□□ 0.55
ERCC1P07992 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ERCC1P07992 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.46■□□□□ 0.55
ERCC1P07992 NTF6G-201ENST00000591094 616 ntBASIC18.46■□□□□ 0.55
ERCC1P07992 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ERCC1P07992 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ERCC1P07992 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
ERCC1P07992 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ERCC1P07992 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.46■□□□□ 0.55
ERCC1P07992 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ERCC1P07992 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ERCC1P07992 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ERCC1P07992 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
ERCC1P07992 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
ERCC1P07992 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
ERCC1P07992 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ERCC1P07992 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ERCC1P07992 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
ERCC1P07992 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ERCC1P07992 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ERCC1P07992 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ERCC1P07992 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ERCC1P07992 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
ERCC1P07992 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.45■□□□□ 0.54
ERCC1P07992 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.45■□□□□ 0.54
ERCC1P07992 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ERCC1P07992 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.45■□□□□ 0.54
ERCC1P07992 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.45■□□□□ 0.54
ERCC1P07992 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ERCC1P07992 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ERCC1P07992 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.45■□□□□ 0.54
ERCC1P07992 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ERCC1P07992 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ERCC1P07992 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.44■□□□□ 0.54
ERCC1P07992 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ERCC1P07992 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ERCC1P07992 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
ERCC1P07992 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
ERCC1P07992 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.44■□□□□ 0.54
ERCC1P07992 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ERCC1P07992 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
ERCC1P07992 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ERCC1P07992 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ERCC1P07992 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.44■□□□□ 0.54
ERCC1P07992 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.44■□□□□ 0.54
ERCC1P07992 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ERCC1P07992 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
ERCC1P07992 AC073130.3-201ENST00000624389 2278 ntBASIC18.44■□□□□ 0.54
ERCC1P07992 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ERCC1P07992 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
ERCC1P07992 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.44■□□□□ 0.54
ERCC1P07992 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ERCC1P07992 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ERCC1P07992 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ERCC1P07992 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ERCC1P07992 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ERCC1P07992 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
ERCC1P07992 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ERCC1P07992 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ERCC1P07992 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
ERCC1P07992 SMUG1P1-201ENST00000590640 811 ntBASIC18.43■□□□□ 0.54
ERCC1P07992 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ERCC1P07992 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ERCC1P07992 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ERCC1P07992 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
ERCC1P07992 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ERCC1P07992 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.43■□□□□ 0.54
ERCC1P07992 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.42■□□□□ 0.54
ERCC1P07992 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ERCC1P07992 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ERCC1P07992 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
ERCC1P07992 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ERCC1P07992 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ERCC1P07992 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
ERCC1P07992 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ERCC1P07992 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
ERCC1P07992 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ERCC1P07992 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
ERCC1P07992 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.42■□□□□ 0.54
ERCC1P07992 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ERCC1P07992 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.42■□□□□ 0.54
ERCC1P07992 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ERCC1P07992 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ERCC1P07992 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
ERCC1P07992 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.42■□□□□ 0.54
ERCC1P07992 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.42■□□□□ 0.54
ERCC1P07992 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.42■□□□□ 0.54
ERCC1P07992 AC022517.1-201ENST00000592429 346 ntBASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms