Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.12■□□□□ 0.97
RETP07949 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
RETP07949 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.12■□□□□ 0.97
RETP07949 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.12■□□□□ 0.97
RETP07949 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
RETP07949 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RETP07949 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RETP07949 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.12■□□□□ 0.97
RETP07949 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
RETP07949 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
RETP07949 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RETP07949 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.12■□□□□ 0.97
RETP07949 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.12■□□□□ 0.97
RETP07949 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RETP07949 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
RETP07949 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RETP07949 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RETP07949 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
RETP07949 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.11■□□□□ 0.97
RETP07949 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RETP07949 EEF1DP3-203ENST00000566025 782 ntBASIC21.11■□□□□ 0.97
RETP07949 MIR4497-201ENST00000583208 89 ntBASIC21.11■□□□□ 0.97
RETP07949 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.11■□□□□ 0.97
RETP07949 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21.11■□□□□ 0.97
RETP07949 AL359736.2-201ENST00000621992 437 ntBASIC21.11■□□□□ 0.97
RETP07949 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
RETP07949 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RETP07949 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RETP07949 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RETP07949 AC010980.2-201ENST00000587099 1412 ntBASIC21.11■□□□□ 0.97
RETP07949 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.11■□□□□ 0.97
RETP07949 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.11■□□□□ 0.97
RETP07949 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RETP07949 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
RETP07949 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RETP07949 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RETP07949 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RETP07949 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RETP07949 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RETP07949 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.1■□□□□ 0.97
RETP07949 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.1■□□□□ 0.97
RETP07949 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.1■□□□□ 0.97
RETP07949 AL162412.1-201ENST00000567129 965 ntBASIC21.1■□□□□ 0.97
RETP07949 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC21.1■□□□□ 0.97
RETP07949 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21.1■□□□□ 0.97
RETP07949 AC053503.5-201ENST00000601508 636 ntBASIC21.1■□□□□ 0.97
RETP07949 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RETP07949 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RETP07949 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RETP07949 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.1■□□□□ 0.97
RETP07949 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RETP07949 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
RETP07949 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
RETP07949 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RETP07949 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RETP07949 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RETP07949 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RETP07949 GXYLT1P3-201ENST00000453058 1193 ntBASIC21.09■□□□□ 0.97
RETP07949 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.09■□□□□ 0.97
RETP07949 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.09■□□□□ 0.97
RETP07949 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.09■□□□□ 0.97
RETP07949 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RETP07949 AC120498.10-201ENST00000621827 505 ntBASIC21.09■□□□□ 0.97
RETP07949 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RETP07949 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.09■□□□□ 0.97
RETP07949 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.09■□□□□ 0.97
RETP07949 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RETP07949 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
RETP07949 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RETP07949 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.08■□□□□ 0.97
RETP07949 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.08■□□□□ 0.97
RETP07949 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RETP07949 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RETP07949 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RETP07949 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RETP07949 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.08■□□□□ 0.97
RETP07949 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RETP07949 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RETP07949 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
RETP07949 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RETP07949 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RETP07949 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RETP07949 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC21.08■□□□□ 0.97
RETP07949 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.08■□□□□ 0.97
RETP07949 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.08■□□□□ 0.97
RETP07949 AC010331.1-201ENST00000611423 582 ntBASIC21.08■□□□□ 0.97
RETP07949 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.08■□□□□ 0.97
RETP07949 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
RETP07949 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
RETP07949 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.08■□□□□ 0.96
RETP07949 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RETP07949 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
RETP07949 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RETP07949 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RETP07949 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.07■□□□□ 0.96
RETP07949 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.07■□□□□ 0.96
RETP07949 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
RETP07949 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.07■□□□□ 0.96
RETP07949 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC21.07■□□□□ 0.96
RETP07949 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms