Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HLA-DQA2P01906 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HLA-DQA2P01906 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.72■□□□□ 0.59
HLA-DQA2P01906 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.72■□□□□ 0.59
HLA-DQA2P01906 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.72■□□□□ 0.59
HLA-DQA2P01906 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HLA-DQA2P01906 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HLA-DQA2P01906 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HLA-DQA2P01906 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HLA-DQA2P01906 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DQA2P01906 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.71■□□□□ 0.59
HLA-DQA2P01906 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DQA2P01906 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
HLA-DQA2P01906 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DQA2P01906 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.71■□□□□ 0.59
HLA-DQA2P01906 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DQA2P01906 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DQA2P01906 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DQA2P01906 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.71■□□□□ 0.59
HLA-DQA2P01906 EDA-201ENST00000338901 1233 ntBASIC18.71■□□□□ 0.59
HLA-DQA2P01906 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
HLA-DQA2P01906 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.71■□□□□ 0.59
HLA-DQA2P01906 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.71■□□□□ 0.59
HLA-DQA2P01906 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.71■□□□□ 0.59
HLA-DQA2P01906 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.71■□□□□ 0.59
HLA-DQA2P01906 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DQA2P01906 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.71■□□□□ 0.59
HLA-DQA2P01906 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.71■□□□□ 0.59
HLA-DQA2P01906 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.71■□□□□ 0.59
HLA-DQA2P01906 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DQA2P01906 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DQA2P01906 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DQA2P01906 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
HLA-DQA2P01906 AL049796.1-201ENST00000565336 1766 ntBASIC18.7■□□□□ 0.58
HLA-DQA2P01906 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DQA2P01906 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DQA2P01906 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DQA2P01906 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DQA2P01906 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DQA2P01906 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DQA2P01906 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DQA2P01906 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DQA2P01906 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.7■□□□□ 0.58
HLA-DQA2P01906 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DQA2P01906 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DQA2P01906 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DQA2P01906 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
HLA-DQA2P01906 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.7■□□□□ 0.58
HLA-DQA2P01906 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.7■□□□□ 0.58
HLA-DQA2P01906 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.7■□□□□ 0.58
HLA-DQA2P01906 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DQA2P01906 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
HLA-DQA2P01906 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.7■□□□□ 0.58
HLA-DQA2P01906 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DQA2P01906 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.7■□□□□ 0.58
HLA-DQA2P01906 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DQA2P01906 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DQA2P01906 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DQA2P01906 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
HLA-DQA2P01906 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
HLA-DQA2P01906 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DQA2P01906 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
HLA-DQA2P01906 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DQA2P01906 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DQA2P01906 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DQA2P01906 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
HLA-DQA2P01906 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DQA2P01906 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.69■□□□□ 0.58
HLA-DQA2P01906 AP001330.3-201ENST00000520123 633 ntBASIC18.69■□□□□ 0.58
HLA-DQA2P01906 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
HLA-DQA2P01906 AL355001.2-201ENST00000620617 1191 ntBASIC18.69■□□□□ 0.58
HLA-DQA2P01906 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DQA2P01906 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.69■□□□□ 0.58
HLA-DQA2P01906 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DQA2P01906 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
HLA-DQA2P01906 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.69■□□□□ 0.58
HLA-DQA2P01906 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
HLA-DQA2P01906 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
HLA-DQA2P01906 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DQA2P01906 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DQA2P01906 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.68■□□□□ 0.58
HLA-DQA2P01906 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DQA2P01906 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DQA2P01906 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DQA2P01906 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.68■□□□□ 0.58
HLA-DQA2P01906 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
HLA-DQA2P01906 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.68■□□□□ 0.58
HLA-DQA2P01906 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DQA2P01906 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
HLA-DQA2P01906 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DQA2P01906 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DQA2P01906 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.68■□□□□ 0.58
HLA-DQA2P01906 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DQA2P01906 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.67■□□□□ 0.58
HLA-DQA2P01906 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DQA2P01906 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DQA2P01906 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.67■□□□□ 0.58
HLA-DQA2P01906 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DQA2P01906 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DQA2P01906 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms