Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.64■□□□□ 0.74
CLPTM1O96005 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.64■□□□□ 0.74
CLPTM1O96005 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
CLPTM1O96005 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
CLPTM1O96005 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CLPTM1O96005 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLPTM1O96005 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CLPTM1O96005 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLPTM1O96005 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.64■□□□□ 0.73
CLPTM1O96005 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLPTM1O96005 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.64■□□□□ 0.73
CLPTM1O96005 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.64■□□□□ 0.73
CLPTM1O96005 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.64■□□□□ 0.73
CLPTM1O96005 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLPTM1O96005 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.64■□□□□ 0.73
CLPTM1O96005 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.64■□□□□ 0.73
CLPTM1O96005 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLPTM1O96005 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.64■□□□□ 0.73
CLPTM1O96005 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CLPTM1O96005 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLPTM1O96005 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLPTM1O96005 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CLPTM1O96005 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLPTM1O96005 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLPTM1O96005 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLPTM1O96005 AC098818.2-201ENST00000564925 2320 ntBASIC19.63■□□□□ 0.73
CLPTM1O96005 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.63■□□□□ 0.73
CLPTM1O96005 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLPTM1O96005 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLPTM1O96005 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CLPTM1O96005 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLPTM1O96005 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLPTM1O96005 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLPTM1O96005 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.63■□□□□ 0.73
CLPTM1O96005 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.63■□□□□ 0.73
CLPTM1O96005 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLPTM1O96005 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CLPTM1O96005 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLPTM1O96005 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLPTM1O96005 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLPTM1O96005 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.63■□□□□ 0.73
CLPTM1O96005 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLPTM1O96005 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLPTM1O96005 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLPTM1O96005 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
CLPTM1O96005 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLPTM1O96005 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.63■□□□□ 0.73
CLPTM1O96005 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLPTM1O96005 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLPTM1O96005 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CLPTM1O96005 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLPTM1O96005 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLPTM1O96005 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLPTM1O96005 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLPTM1O96005 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CLPTM1O96005 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLPTM1O96005 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CLPTM1O96005 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLPTM1O96005 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLPTM1O96005 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.62■□□□□ 0.73
CLPTM1O96005 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLPTM1O96005 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CLPTM1O96005 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CLPTM1O96005 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLPTM1O96005 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLPTM1O96005 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.61■□□□□ 0.73
CLPTM1O96005 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLPTM1O96005 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.61■□□□□ 0.73
CLPTM1O96005 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.61■□□□□ 0.73
CLPTM1O96005 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLPTM1O96005 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLPTM1O96005 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
CLPTM1O96005 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLPTM1O96005 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.61■□□□□ 0.73
CLPTM1O96005 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.61■□□□□ 0.73
CLPTM1O96005 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.61■□□□□ 0.73
CLPTM1O96005 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.61■□□□□ 0.73
CLPTM1O96005 AL049796.1-201ENST00000565336 1766 ntBASIC19.61■□□□□ 0.73
CLPTM1O96005 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.61■□□□□ 0.73
CLPTM1O96005 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLPTM1O96005 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CLPTM1O96005 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLPTM1O96005 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.61■□□□□ 0.73
CLPTM1O96005 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLPTM1O96005 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLPTM1O96005 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CLPTM1O96005 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLPTM1O96005 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.6■□□□□ 0.73
CLPTM1O96005 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLPTM1O96005 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CLPTM1O96005 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.6■□□□□ 0.73
CLPTM1O96005 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLPTM1O96005 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLPTM1O96005 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLPTM1O96005 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.6■□□□□ 0.73
CLPTM1O96005 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLPTM1O96005 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.6■□□□□ 0.73
CLPTM1O96005 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
CLPTM1O96005 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.6■□□□□ 0.73
CLPTM1O96005 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms