Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRUB2O95900 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRUB2O95900 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRUB2O95900 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TRUB2O95900 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TRUB2O95900 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.94■■□□□ 1.1
TRUB2O95900 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.94■■□□□ 1.1
TRUB2O95900 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TRUB2O95900 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.94■■□□□ 1.1
TRUB2O95900 AC061975.6-201ENST00000579045 1553 ntBASIC21.94■■□□□ 1.1
TRUB2O95900 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TRUB2O95900 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TRUB2O95900 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
TRUB2O95900 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
TRUB2O95900 AC016769.1-201ENST00000409132 1010 ntBASIC21.93■■□□□ 1.1
TRUB2O95900 POU5F1P4-201ENST00000413175 1085 ntBASIC21.93■■□□□ 1.1
TRUB2O95900 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.93■■□□□ 1.1
TRUB2O95900 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TRUB2O95900 KRT18P20-201ENST00000548986 1279 ntBASIC21.93■■□□□ 1.1
TRUB2O95900 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.93■■□□□ 1.1
TRUB2O95900 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.93■■□□□ 1.1
TRUB2O95900 AC092666.2-201ENST00000613287 246 ntBASIC21.93■■□□□ 1.1
TRUB2O95900 AC092437.1-201ENST00000624794 1048 ntBASIC21.93■■□□□ 1.1
TRUB2O95900 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
TRUB2O95900 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.92■■□□□ 1.1
TRUB2O95900 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRUB2O95900 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRUB2O95900 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TRUB2O95900 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.92■■□□□ 1.1
TRUB2O95900 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TRUB2O95900 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRUB2O95900 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TRUB2O95900 AC006015.1-201ENST00000429970 570 ntBASIC21.92■■□□□ 1.1
TRUB2O95900 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.92■■□□□ 1.1
TRUB2O95900 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.92■■□□□ 1.1
TRUB2O95900 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRUB2O95900 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
TRUB2O95900 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRUB2O95900 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRUB2O95900 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRUB2O95900 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRUB2O95900 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRUB2O95900 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRUB2O95900 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRUB2O95900 SLC7A5P2-201ENST00000553010 536 ntBASIC21.91■■□□□ 1.1
TRUB2O95900 UBE2DNL-204ENST00000602536 740 ntBASIC21.91■■□□□ 1.1
TRUB2O95900 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRUB2O95900 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRUB2O95900 AL049796.1-201ENST00000565336 1766 ntBASIC21.91■■□□□ 1.1
TRUB2O95900 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TRUB2O95900 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.91■■□□□ 1.1
TRUB2O95900 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.9■■□□□ 1.1
TRUB2O95900 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TRUB2O95900 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TRUB2O95900 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TRUB2O95900 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
TRUB2O95900 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.9■■□□□ 1.1
TRUB2O95900 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
TRUB2O95900 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.9■■□□□ 1.1
TRUB2O95900 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.9■■□□□ 1.1
TRUB2O95900 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
TRUB2O95900 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
TRUB2O95900 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
TRUB2O95900 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.9■■□□□ 1.1
TRUB2O95900 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
TRUB2O95900 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
TRUB2O95900 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
TRUB2O95900 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TRUB2O95900 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
TRUB2O95900 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TRUB2O95900 KRT18P11-201ENST00000435214 1283 ntBASIC21.89■■□□□ 1.09
TRUB2O95900 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.89■■□□□ 1.09
TRUB2O95900 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.89■■□□□ 1.09
TRUB2O95900 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.89■■□□□ 1.09
TRUB2O95900 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.89■■□□□ 1.09
TRUB2O95900 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TRUB2O95900 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
TRUB2O95900 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TRUB2O95900 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.89■■□□□ 1.09
TRUB2O95900 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TRUB2O95900 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TRUB2O95900 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
TRUB2O95900 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.88■■□□□ 1.09
TRUB2O95900 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRUB2O95900 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.88■■□□□ 1.09
TRUB2O95900 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
TRUB2O95900 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TRUB2O95900 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.88■■□□□ 1.09
TRUB2O95900 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.88■■□□□ 1.09
TRUB2O95900 AC120498.10-201ENST00000621827 505 ntBASIC21.88■■□□□ 1.09
TRUB2O95900 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TRUB2O95900 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRUB2O95900 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.88■■□□□ 1.09
TRUB2O95900 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRUB2O95900 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.88■■□□□ 1.09
TRUB2O95900 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRUB2O95900 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRUB2O95900 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TRUB2O95900 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TRUB2O95900 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms