Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
GGPS1O95749 BX276092.2-201ENST00000417668 665 ntBASIC23.55■■□□□ 1.36
GGPS1O95749 RARRES2P4-201ENST00000514074 484 ntBASIC23.55■■□□□ 1.36
GGPS1O95749 CD44-222ENST00000526025 1052 ntTSL 2 BASIC23.55■■□□□ 1.36
GGPS1O95749 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
GGPS1O95749 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
GGPS1O95749 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC23.55■■□□□ 1.36
GGPS1O95749 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
GGPS1O95749 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
GGPS1O95749 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC23.54■■□□□ 1.36
GGPS1O95749 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
GGPS1O95749 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
GGPS1O95749 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC23.54■■□□□ 1.36
GGPS1O95749 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC23.54■■□□□ 1.36
GGPS1O95749 MIR4651-201ENST00000582622 73 ntBASIC23.54■■□□□ 1.36
GGPS1O95749 AC092118.2-201ENST00000613495 667 ntBASIC23.54■■□□□ 1.36
GGPS1O95749 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
GGPS1O95749 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
GGPS1O95749 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
GGPS1O95749 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
GGPS1O95749 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
GGPS1O95749 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
GGPS1O95749 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC23.54■■□□□ 1.36
GGPS1O95749 ECEL1P1-201ENST00000373592 1742 ntBASIC23.53■■□□□ 1.36
GGPS1O95749 EP400NL-214ENST00000641289 2402 ntBASIC23.53■■□□□ 1.36
GGPS1O95749 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
GGPS1O95749 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.53■■□□□ 1.36
GGPS1O95749 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
GGPS1O95749 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC23.53■■□□□ 1.36
GGPS1O95749 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
GGPS1O95749 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC23.53■■□□□ 1.36
GGPS1O95749 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
GGPS1O95749 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
GGPS1O95749 PBX1-209ENST00000485769 834 ntTSL 2 BASIC23.53■■□□□ 1.36
GGPS1O95749 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
GGPS1O95749 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC23.53■■□□□ 1.36
GGPS1O95749 AC242852.2-201ENST00000615738 1807 ntBASIC23.53■■□□□ 1.36
GGPS1O95749 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
GGPS1O95749 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
GGPS1O95749 NARF-205ENST00000412079 1760 ntTSL 5 BASIC23.52■■□□□ 1.36
GGPS1O95749 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
GGPS1O95749 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
GGPS1O95749 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
GGPS1O95749 AC010980.2-201ENST00000587099 1412 ntBASIC23.52■■□□□ 1.36
GGPS1O95749 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
GGPS1O95749 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
GGPS1O95749 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC23.52■■□□□ 1.36
GGPS1O95749 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC23.52■■□□□ 1.36
GGPS1O95749 AC245052.3-201ENST00000450182 901 ntBASIC23.52■■□□□ 1.36
GGPS1O95749 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC23.52■■□□□ 1.36
GGPS1O95749 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC23.52■■□□□ 1.36
GGPS1O95749 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC23.52■■□□□ 1.36
GGPS1O95749 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
GGPS1O95749 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
GGPS1O95749 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
GGPS1O95749 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
GGPS1O95749 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
GGPS1O95749 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
GGPS1O95749 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
GGPS1O95749 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
GGPS1O95749 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC23.51■■□□□ 1.35
GGPS1O95749 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
GGPS1O95749 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC23.51■■□□□ 1.35
GGPS1O95749 AC091799.1-201ENST00000422823 811 ntBASIC23.51■■□□□ 1.35
GGPS1O95749 ISCU-212ENST00000547005 795 ntTSL 3 BASIC23.51■■□□□ 1.35
GGPS1O95749 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC23.51■■□□□ 1.35
GGPS1O95749 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
GGPS1O95749 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
GGPS1O95749 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
GGPS1O95749 CLDN5-201ENST00000403084 2357 ntBASIC23.5■■□□□ 1.35
GGPS1O95749 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
GGPS1O95749 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
GGPS1O95749 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
GGPS1O95749 TBCB-214ENST00000629269 413 ntTSL 5 BASIC23.5■■□□□ 1.35
GGPS1O95749 TMEM191A-211ENST00000637163 1067 ntBASIC23.5■■□□□ 1.35
GGPS1O95749 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
GGPS1O95749 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
GGPS1O95749 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
GGPS1O95749 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
GGPS1O95749 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
GGPS1O95749 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC23.49■■□□□ 1.35
GGPS1O95749 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
GGPS1O95749 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC23.49■■□□□ 1.35
GGPS1O95749 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC23.49■■□□□ 1.35
GGPS1O95749 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC23.49■■□□□ 1.35
GGPS1O95749 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC23.49■■□□□ 1.35
GGPS1O95749 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
GGPS1O95749 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC23.49■■□□□ 1.35
GGPS1O95749 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
GGPS1O95749 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
GGPS1O95749 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
GGPS1O95749 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
GGPS1O95749 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
GGPS1O95749 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
GGPS1O95749 STX5-203ENST00000394690 1568 ntTSL 5 BASIC23.48■■□□□ 1.35
GGPS1O95749 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
GGPS1O95749 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
GGPS1O95749 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
GGPS1O95749 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
GGPS1O95749 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms