Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTP4A3O75365 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTP4A3O75365 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTP4A3O75365 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PTP4A3O75365 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
PTP4A3O75365 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
PTP4A3O75365 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
PTP4A3O75365 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTP4A3O75365 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
PTP4A3O75365 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.84■□□□□ 0.61
PTP4A3O75365 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.84■□□□□ 0.61
PTP4A3O75365 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTP4A3O75365 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTP4A3O75365 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTP4A3O75365 AC012414.1-201ENST00000556676 535 ntBASIC18.84■□□□□ 0.61
PTP4A3O75365 AF213884.3-201ENST00000563833 479 ntBASIC18.84■□□□□ 0.61
PTP4A3O75365 EEF1DP3-203ENST00000566025 782 ntBASIC18.84■□□□□ 0.61
PTP4A3O75365 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PTP4A3O75365 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTP4A3O75365 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTP4A3O75365 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTP4A3O75365 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTP4A3O75365 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
PTP4A3O75365 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTP4A3O75365 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTP4A3O75365 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.84■□□□□ 0.61
PTP4A3O75365 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.83■□□□□ 0.61
PTP4A3O75365 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PTP4A3O75365 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PTP4A3O75365 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
PTP4A3O75365 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PTP4A3O75365 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PTP4A3O75365 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTP4A3O75365 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTP4A3O75365 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTP4A3O75365 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.83■□□□□ 0.6
PTP4A3O75365 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.83■□□□□ 0.6
PTP4A3O75365 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.83■□□□□ 0.6
PTP4A3O75365 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.83■□□□□ 0.6
PTP4A3O75365 AC053503.5-201ENST00000601508 636 ntBASIC18.83■□□□□ 0.6
PTP4A3O75365 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
PTP4A3O75365 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.83■□□□□ 0.6
PTP4A3O75365 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
PTP4A3O75365 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTP4A3O75365 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTP4A3O75365 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.83■□□□□ 0.6
PTP4A3O75365 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
PTP4A3O75365 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTP4A3O75365 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTP4A3O75365 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTP4A3O75365 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.82■□□□□ 0.6
PTP4A3O75365 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTP4A3O75365 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
PTP4A3O75365 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.82■□□□□ 0.6
PTP4A3O75365 GABARAPL3-202ENST00000624044 1851 ntBASIC18.82■□□□□ 0.6
PTP4A3O75365 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTP4A3O75365 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.82■□□□□ 0.6
PTP4A3O75365 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.82■□□□□ 0.6
PTP4A3O75365 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTP4A3O75365 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PTP4A3O75365 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PTP4A3O75365 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTP4A3O75365 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTP4A3O75365 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.82■□□□□ 0.6
PTP4A3O75365 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.82■□□□□ 0.6
PTP4A3O75365 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.82■□□□□ 0.6
PTP4A3O75365 AC091305.1-201ENST00000479476 895 ntBASIC18.82■□□□□ 0.6
PTP4A3O75365 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.82■□□□□ 0.6
PTP4A3O75365 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.82■□□□□ 0.6
PTP4A3O75365 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTP4A3O75365 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PTP4A3O75365 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PTP4A3O75365 AP005212.1-201ENST00000581547 1997 ntBASIC18.82■□□□□ 0.6
PTP4A3O75365 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.82■□□□□ 0.6
PTP4A3O75365 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTP4A3O75365 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTP4A3O75365 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTP4A3O75365 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTP4A3O75365 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PTP4A3O75365 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PTP4A3O75365 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
PTP4A3O75365 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTP4A3O75365 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
PTP4A3O75365 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
PTP4A3O75365 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.81■□□□□ 0.6
PTP4A3O75365 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTP4A3O75365 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.81■□□□□ 0.6
PTP4A3O75365 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTP4A3O75365 SUDS3P1-201ENST00000505831 966 ntBASIC18.81■□□□□ 0.6
PTP4A3O75365 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.81■□□□□ 0.6
PTP4A3O75365 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.81■□□□□ 0.6
PTP4A3O75365 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTP4A3O75365 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTP4A3O75365 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTP4A3O75365 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTP4A3O75365 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.8■□□□□ 0.6
PTP4A3O75365 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTP4A3O75365 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTP4A3O75365 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTP4A3O75365 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms