Protein–RNA interactions for Protein: O75317

USP12, Ubiquitin carboxyl-terminal hydrolase 12, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP12O75317 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.35■■□□□ 1.01
USP12O75317 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
USP12O75317 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
USP12O75317 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.34■■□□□ 1.01
USP12O75317 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
USP12O75317 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
USP12O75317 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
USP12O75317 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.34■■□□□ 1.01
USP12O75317 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.34■■□□□ 1.01
USP12O75317 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.34■■□□□ 1.01
USP12O75317 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.34■■□□□ 1.01
USP12O75317 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.34■■□□□ 1.01
USP12O75317 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.34■■□□□ 1.01
USP12O75317 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
USP12O75317 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.34■■□□□ 1.01
USP12O75317 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
USP12O75317 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.34■■□□□ 1.01
USP12O75317 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.33■■□□□ 1.01
USP12O75317 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
USP12O75317 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
USP12O75317 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.33■■□□□ 1.01
USP12O75317 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
USP12O75317 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.33■■□□□ 1.01
USP12O75317 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
USP12O75317 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.33■■□□□ 1.01
USP12O75317 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
USP12O75317 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
USP12O75317 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
USP12O75317 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.33■■□□□ 1
USP12O75317 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
USP12O75317 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
USP12O75317 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.33■■□□□ 1
USP12O75317 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
USP12O75317 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.32■■□□□ 1
USP12O75317 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
USP12O75317 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.32■■□□□ 1
USP12O75317 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.32■■□□□ 1
USP12O75317 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.32■■□□□ 1
USP12O75317 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.32■■□□□ 1
USP12O75317 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.32■■□□□ 1
USP12O75317 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.32■■□□□ 1
USP12O75317 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.32■■□□□ 1
USP12O75317 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.32■■□□□ 1
USP12O75317 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.32■■□□□ 1
USP12O75317 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
USP12O75317 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
USP12O75317 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
USP12O75317 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.32■■□□□ 1
USP12O75317 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
USP12O75317 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.32■■□□□ 1
USP12O75317 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
USP12O75317 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.31■■□□□ 1
USP12O75317 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
USP12O75317 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
USP12O75317 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
USP12O75317 HLA-L-209ENST00000420110 1011 ntBASIC21.31■■□□□ 1
USP12O75317 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.31■■□□□ 1
USP12O75317 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.31■■□□□ 1
USP12O75317 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.31■■□□□ 1
USP12O75317 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
USP12O75317 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.31■■□□□ 1
USP12O75317 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.31■■□□□ 1
USP12O75317 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
USP12O75317 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.3■■□□□ 1
USP12O75317 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
USP12O75317 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
USP12O75317 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.3■■□□□ 1
USP12O75317 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.3■■□□□ 1
USP12O75317 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.3■■□□□ 1
USP12O75317 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.3■■□□□ 1
USP12O75317 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.3■■□□□ 1
USP12O75317 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
USP12O75317 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
USP12O75317 AL049796.1-201ENST00000565336 1766 ntBASIC21.3■■□□□ 1
USP12O75317 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
USP12O75317 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.29■■□□□ 1
USP12O75317 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.29■■□□□ 1
USP12O75317 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.29■■□□□ 1
USP12O75317 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.29■■□□□ 1
USP12O75317 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
USP12O75317 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.29■■□□□ 1
USP12O75317 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
USP12O75317 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.29■■□□□ 1
USP12O75317 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.29■■□□□ 1
USP12O75317 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
USP12O75317 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
USP12O75317 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
USP12O75317 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
USP12O75317 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
USP12O75317 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.28■■□□□ 1
USP12O75317 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.28■■□□□ 1
USP12O75317 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.28■■□□□ 1
USP12O75317 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.28■■□□□ 1
USP12O75317 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.28■■□□□ 1
USP12O75317 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.28■■□□□ 1
USP12O75317 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
USP12O75317 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.28■■□□□ 1
USP12O75317 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
USP12O75317 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
USP12O75317 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms