Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
LCMT2O60294 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.03■□□□□ 0.8
LCMT2O60294 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.03■□□□□ 0.8
LCMT2O60294 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LCMT2O60294 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.03■□□□□ 0.8
LCMT2O60294 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
LCMT2O60294 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LCMT2O60294 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
LCMT2O60294 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LCMT2O60294 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
LCMT2O60294 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
LCMT2O60294 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LCMT2O60294 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LCMT2O60294 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
LCMT2O60294 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LCMT2O60294 AC006015.1-201ENST00000429970 570 ntBASIC20.02■□□□□ 0.8
LCMT2O60294 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.02■□□□□ 0.8
LCMT2O60294 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.02■□□□□ 0.8
LCMT2O60294 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.02■□□□□ 0.8
LCMT2O60294 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.02■□□□□ 0.8
LCMT2O60294 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.02■□□□□ 0.8
LCMT2O60294 AC092437.1-201ENST00000624794 1048 ntBASIC20.02■□□□□ 0.8
LCMT2O60294 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LCMT2O60294 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
LCMT2O60294 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LCMT2O60294 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
LCMT2O60294 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LCMT2O60294 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
LCMT2O60294 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LCMT2O60294 KRT16P2-201ENST00000414673 1423 ntBASIC20.02■□□□□ 0.79
LCMT2O60294 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
LCMT2O60294 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LCMT2O60294 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.01■□□□□ 0.79
LCMT2O60294 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LCMT2O60294 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LCMT2O60294 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LCMT2O60294 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.01■□□□□ 0.79
LCMT2O60294 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
LCMT2O60294 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.01■□□□□ 0.79
LCMT2O60294 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.01■□□□□ 0.79
LCMT2O60294 AC120498.10-201ENST00000621827 505 ntBASIC20.01■□□□□ 0.79
LCMT2O60294 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.01■□□□□ 0.79
LCMT2O60294 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
LCMT2O60294 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
LCMT2O60294 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LCMT2O60294 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.01■□□□□ 0.79
LCMT2O60294 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LCMT2O60294 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LCMT2O60294 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20■□□□□ 0.79
LCMT2O60294 AC016769.1-201ENST00000409132 1010 ntBASIC20■□□□□ 0.79
LCMT2O60294 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20■□□□□ 0.79
LCMT2O60294 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20■□□□□ 0.79
LCMT2O60294 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20■□□□□ 0.79
LCMT2O60294 SLC7A5P1-201ENST00000568957 537 ntBASIC20■□□□□ 0.79
LCMT2O60294 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20■□□□□ 0.79
LCMT2O60294 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20■□□□□ 0.79
LCMT2O60294 MYCNOS-205ENST00000641950 531 ntBASIC20■□□□□ 0.79
LCMT2O60294 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
LCMT2O60294 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
LCMT2O60294 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
LCMT2O60294 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LCMT2O60294 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LCMT2O60294 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
LCMT2O60294 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.99■□□□□ 0.79
LCMT2O60294 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LCMT2O60294 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.99■□□□□ 0.79
LCMT2O60294 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LCMT2O60294 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.99■□□□□ 0.79
LCMT2O60294 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LCMT2O60294 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.99■□□□□ 0.79
LCMT2O60294 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LCMT2O60294 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LCMT2O60294 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LCMT2O60294 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LCMT2O60294 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.99■□□□□ 0.79
LCMT2O60294 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.99■□□□□ 0.79
LCMT2O60294 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.99■□□□□ 0.79
LCMT2O60294 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.99■□□□□ 0.79
LCMT2O60294 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.98■□□□□ 0.79
LCMT2O60294 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.98■□□□□ 0.79
LCMT2O60294 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.98■□□□□ 0.79
LCMT2O60294 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LCMT2O60294 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
LCMT2O60294 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
LCMT2O60294 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
LCMT2O60294 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LCMT2O60294 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
LCMT2O60294 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.98■□□□□ 0.79
LCMT2O60294 RARRES2P11-201ENST00000635158 484 ntBASIC19.98■□□□□ 0.79
LCMT2O60294 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
LCMT2O60294 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LCMT2O60294 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.98■□□□□ 0.79
LCMT2O60294 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.97■□□□□ 0.79
LCMT2O60294 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LCMT2O60294 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LCMT2O60294 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LCMT2O60294 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LCMT2O60294 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.97■□□□□ 0.79
LCMT2O60294 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.97■□□□□ 0.79
LCMT2O60294 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms