Protein–RNA interactions for Protein: O43916

CHST1, Carbohydrate sulfotransferase 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHST1O43916 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHST1O43916 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHST1O43916 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHST1O43916 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHST1O43916 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHST1O43916 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHST1O43916 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHST1O43916 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHST1O43916 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.4■□□□□ 0.38
CHST1O43916 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.4■□□□□ 0.38
CHST1O43916 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC17.4■□□□□ 0.38
CHST1O43916 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHST1O43916 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.4■□□□□ 0.38
CHST1O43916 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC17.4■□□□□ 0.38
CHST1O43916 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHST1O43916 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.4■□□□□ 0.38
CHST1O43916 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CHST1O43916 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHST1O43916 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHST1O43916 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.4■□□□□ 0.38
CHST1O43916 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHST1O43916 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.4■□□□□ 0.38
CHST1O43916 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHST1O43916 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CHST1O43916 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.39■□□□□ 0.38
CHST1O43916 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CHST1O43916 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CHST1O43916 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHST1O43916 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CHST1O43916 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CHST1O43916 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHST1O43916 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHST1O43916 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.39■□□□□ 0.37
CHST1O43916 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
CHST1O43916 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CHST1O43916 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC17.39■□□□□ 0.37
CHST1O43916 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CHST1O43916 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CHST1O43916 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHST1O43916 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CHST1O43916 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHST1O43916 USP45-205ENST00000472914 1617 ntTSL 5 BASIC17.39■□□□□ 0.37
CHST1O43916 LINC02228-203ENST00000641970 1355 ntBASIC17.39■□□□□ 0.37
CHST1O43916 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHST1O43916 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHST1O43916 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHST1O43916 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHST1O43916 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHST1O43916 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHST1O43916 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CHST1O43916 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CHST1O43916 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHST1O43916 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CHST1O43916 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC17.38■□□□□ 0.37
CHST1O43916 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.38■□□□□ 0.37
CHST1O43916 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.38■□□□□ 0.37
CHST1O43916 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHST1O43916 KRT18P5-201ENST00000436075 1291 ntBASIC17.38■□□□□ 0.37
CHST1O43916 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC17.38■□□□□ 0.37
CHST1O43916 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CHST1O43916 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC17.38■□□□□ 0.37
CHST1O43916 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC17.38■□□□□ 0.37
CHST1O43916 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHST1O43916 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHST1O43916 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHST1O43916 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CHST1O43916 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
CHST1O43916 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHST1O43916 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.38■□□□□ 0.37
CHST1O43916 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHST1O43916 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHST1O43916 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CHST1O43916 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CHST1O43916 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHST1O43916 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
CHST1O43916 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHST1O43916 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHST1O43916 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHST1O43916 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CHST1O43916 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC17.37■□□□□ 0.37
CHST1O43916 TERF1P2-201ENST00000583350 1212 ntBASIC17.37■□□□□ 0.37
CHST1O43916 SMUG1P1-201ENST00000590640 811 ntBASIC17.37■□□□□ 0.37
CHST1O43916 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHST1O43916 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHST1O43916 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHST1O43916 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHST1O43916 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHST1O43916 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.37■□□□□ 0.37
CHST1O43916 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHST1O43916 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHST1O43916 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
CHST1O43916 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHST1O43916 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHST1O43916 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CHST1O43916 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHST1O43916 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CHST1O43916 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.36■□□□□ 0.37
CHST1O43916 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.36■□□□□ 0.37
CHST1O43916 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHST1O43916 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms