Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNAI2O43623 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNAI2O43623 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNAI2O43623 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNAI2O43623 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNAI2O43623 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNAI2O43623 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNAI2O43623 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNAI2O43623 RBM38-205ENST00000440234 686 ntTSL 2 BASIC15.55■□□□□ 0.08
SNAI2O43623 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNAI2O43623 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC15.55■□□□□ 0.08
SNAI2O43623 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC15.55■□□□□ 0.08
SNAI2O43623 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNAI2O43623 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNAI2O43623 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SNAI2O43623 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SNAI2O43623 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNAI2O43623 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SNAI2O43623 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNAI2O43623 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SNAI2O43623 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SNAI2O43623 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SNAI2O43623 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC15.54■□□□□ 0.08
SNAI2O43623 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
SNAI2O43623 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SNAI2O43623 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SNAI2O43623 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SNAI2O43623 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SNAI2O43623 LINC01006-201ENST00000333319 2292 ntBASIC15.54■□□□□ 0.08
SNAI2O43623 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC15.54■□□□□ 0.08
SNAI2O43623 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SNAI2O43623 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SNAI2O43623 MIR4787-201ENST00000607364 84 ntBASIC15.54■□□□□ 0.08
SNAI2O43623 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SNAI2O43623 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
SNAI2O43623 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
SNAI2O43623 FEM1AP1-201ENST00000431297 1995 ntBASIC15.54■□□□□ 0.08
SNAI2O43623 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC15.54■□□□□ 0.08
SNAI2O43623 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
SNAI2O43623 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SNAI2O43623 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SNAI2O43623 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SNAI2O43623 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SNAI2O43623 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SNAI2O43623 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
SNAI2O43623 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SNAI2O43623 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SNAI2O43623 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SNAI2O43623 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SNAI2O43623 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SNAI2O43623 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SNAI2O43623 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SNAI2O43623 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SNAI2O43623 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
SNAI2O43623 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SNAI2O43623 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC15.53■□□□□ 0.08
SNAI2O43623 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SNAI2O43623 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SNAI2O43623 LSM4-201ENST00000252816 986 ntTSL 2 BASIC15.53■□□□□ 0.08
SNAI2O43623 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SNAI2O43623 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
SNAI2O43623 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
SNAI2O43623 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC15.53■□□□□ 0.08
SNAI2O43623 AL034346.1-201ENST00000568244 1277 ntBASIC15.53■□□□□ 0.08
SNAI2O43623 AC087239.1-201ENST00000622671 572 ntBASIC15.53■□□□□ 0.08
SNAI2O43623 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
SNAI2O43623 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC15.53■□□□□ 0.08
SNAI2O43623 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
SNAI2O43623 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC15.53■□□□□ 0.08
SNAI2O43623 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SNAI2O43623 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
SNAI2O43623 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC15.52■□□□□ 0.08
SNAI2O43623 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC15.52■□□□□ 0.08
SNAI2O43623 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SNAI2O43623 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SNAI2O43623 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SNAI2O43623 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SNAI2O43623 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
SNAI2O43623 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SNAI2O43623 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SNAI2O43623 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
SNAI2O43623 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
SNAI2O43623 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
SNAI2O43623 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
SNAI2O43623 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC15.52■□□□□ 0.08
SNAI2O43623 pRNA.6-201ENST00000610482 90 ntBASIC15.52■□□□□ 0.08
SNAI2O43623 pRNA.5-201ENST00000612139 90 ntBASIC15.52■□□□□ 0.08
SNAI2O43623 pRNA.11-201ENST00000618423 90 ntBASIC15.52■□□□□ 0.08
SNAI2O43623 pRNA.13-201ENST00000619112 90 ntBASIC15.52■□□□□ 0.08
SNAI2O43623 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SNAI2O43623 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SNAI2O43623 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC15.52■□□□□ 0.07
SNAI2O43623 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SNAI2O43623 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC15.52■□□□□ 0.07
SNAI2O43623 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SNAI2O43623 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
SNAI2O43623 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC15.52■□□□□ 0.07
SNAI2O43623 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SNAI2O43623 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
SNAI2O43623 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms