Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PHGDHO43175 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
PHGDHO43175 PLK5-205ENST00000642079 1969 ntBASIC20.78■□□□□ 0.92
PHGDHO43175 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
PHGDHO43175 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PHGDHO43175 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.78■□□□□ 0.92
PHGDHO43175 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PHGDHO43175 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PHGDHO43175 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.78■□□□□ 0.92
PHGDHO43175 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.78■□□□□ 0.92
PHGDHO43175 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.78■□□□□ 0.92
PHGDHO43175 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PHGDHO43175 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.77■□□□□ 0.92
PHGDHO43175 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.77■□□□□ 0.92
PHGDHO43175 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PHGDHO43175 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
PHGDHO43175 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PHGDHO43175 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.77■□□□□ 0.92
PHGDHO43175 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PHGDHO43175 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
PHGDHO43175 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PHGDHO43175 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.77■□□□□ 0.92
PHGDHO43175 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.77■□□□□ 0.92
PHGDHO43175 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PHGDHO43175 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PHGDHO43175 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
PHGDHO43175 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.77■□□□□ 0.91
PHGDHO43175 LINC01521-201ENST00000504184 1943 ntBASIC20.76■□□□□ 0.91
PHGDHO43175 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PHGDHO43175 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PHGDHO43175 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PHGDHO43175 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PHGDHO43175 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
PHGDHO43175 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.76■□□□□ 0.91
PHGDHO43175 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.76■□□□□ 0.91
PHGDHO43175 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.76■□□□□ 0.91
PHGDHO43175 AC091305.1-201ENST00000479476 895 ntBASIC20.76■□□□□ 0.91
PHGDHO43175 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.76■□□□□ 0.91
PHGDHO43175 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.76■□□□□ 0.91
PHGDHO43175 AL136967.2-201ENST00000623968 743 ntBASIC20.76■□□□□ 0.91
PHGDHO43175 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PHGDHO43175 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
PHGDHO43175 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PHGDHO43175 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.76■□□□□ 0.91
PHGDHO43175 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PHGDHO43175 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PHGDHO43175 FEM1AP1-201ENST00000431297 1995 ntBASIC20.76■□□□□ 0.91
PHGDHO43175 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.75■□□□□ 0.91
PHGDHO43175 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PHGDHO43175 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PHGDHO43175 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PHGDHO43175 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PHGDHO43175 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
PHGDHO43175 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.75■□□□□ 0.91
PHGDHO43175 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
PHGDHO43175 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PHGDHO43175 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.75■□□□□ 0.91
PHGDHO43175 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PHGDHO43175 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PHGDHO43175 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PHGDHO43175 AC006128.1-201ENST00000624704 1661 ntBASIC20.74■□□□□ 0.91
PHGDHO43175 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PHGDHO43175 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.74■□□□□ 0.91
PHGDHO43175 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PHGDHO43175 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PHGDHO43175 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PHGDHO43175 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
PHGDHO43175 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PHGDHO43175 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
PHGDHO43175 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
PHGDHO43175 AC092667.1-201ENST00000434301 2586 ntBASIC20.74■□□□□ 0.91
PHGDHO43175 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
PHGDHO43175 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PHGDHO43175 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.73■□□□□ 0.91
PHGDHO43175 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
PHGDHO43175 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.73■□□□□ 0.91
PHGDHO43175 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.73■□□□□ 0.91
PHGDHO43175 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PHGDHO43175 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PHGDHO43175 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.73■□□□□ 0.91
PHGDHO43175 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.73■□□□□ 0.91
PHGDHO43175 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PHGDHO43175 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.73■□□□□ 0.91
PHGDHO43175 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PHGDHO43175 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PHGDHO43175 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PHGDHO43175 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
PHGDHO43175 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
PHGDHO43175 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PHGDHO43175 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PHGDHO43175 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PHGDHO43175 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PHGDHO43175 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
PHGDHO43175 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
PHGDHO43175 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PHGDHO43175 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PHGDHO43175 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.72■□□□□ 0.91
PHGDHO43175 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.72■□□□□ 0.91
PHGDHO43175 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PHGDHO43175 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms