Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
AP3D1O14617 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
AP3D1O14617 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
AP3D1O14617 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
AP3D1O14617 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
AP3D1O14617 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
AP3D1O14617 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
AP3D1O14617 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
AP3D1O14617 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
AP3D1O14617 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.47■□□□□ 0.71
AP3D1O14617 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
AP3D1O14617 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.47■□□□□ 0.71
AP3D1O14617 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.47■□□□□ 0.71
AP3D1O14617 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
AP3D1O14617 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
AP3D1O14617 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
AP3D1O14617 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
AP3D1O14617 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
AP3D1O14617 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
AP3D1O14617 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
AP3D1O14617 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.46■□□□□ 0.71
AP3D1O14617 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.46■□□□□ 0.71
AP3D1O14617 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
AP3D1O14617 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
AP3D1O14617 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
AP3D1O14617 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
AP3D1O14617 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.46■□□□□ 0.71
AP3D1O14617 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
AP3D1O14617 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
AP3D1O14617 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
AP3D1O14617 MIR638-201ENST00000385237 100 ntBASIC19.46■□□□□ 0.71
AP3D1O14617 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.46■□□□□ 0.71
AP3D1O14617 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
AP3D1O14617 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
AP3D1O14617 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
AP3D1O14617 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.46■□□□□ 0.71
AP3D1O14617 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.46■□□□□ 0.71
AP3D1O14617 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
AP3D1O14617 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
AP3D1O14617 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
AP3D1O14617 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
AP3D1O14617 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
AP3D1O14617 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
AP3D1O14617 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
AP3D1O14617 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
AP3D1O14617 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
AP3D1O14617 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.45■□□□□ 0.7
AP3D1O14617 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
AP3D1O14617 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
AP3D1O14617 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
AP3D1O14617 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.45■□□□□ 0.7
AP3D1O14617 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.45■□□□□ 0.7
AP3D1O14617 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.45■□□□□ 0.7
AP3D1O14617 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.45■□□□□ 0.7
AP3D1O14617 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
AP3D1O14617 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.45■□□□□ 0.7
AP3D1O14617 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
AP3D1O14617 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
AP3D1O14617 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
AP3D1O14617 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
AP3D1O14617 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.44■□□□□ 0.7
AP3D1O14617 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
AP3D1O14617 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
AP3D1O14617 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
AP3D1O14617 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
AP3D1O14617 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
AP3D1O14617 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.44■□□□□ 0.7
AP3D1O14617 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
AP3D1O14617 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
AP3D1O14617 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
AP3D1O14617 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.44■□□□□ 0.7
AP3D1O14617 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.44■□□□□ 0.7
AP3D1O14617 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
AP3D1O14617 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.44■□□□□ 0.7
AP3D1O14617 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
AP3D1O14617 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
AP3D1O14617 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
AP3D1O14617 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
AP3D1O14617 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.43■□□□□ 0.7
AP3D1O14617 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
AP3D1O14617 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.43■□□□□ 0.7
AP3D1O14617 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.43■□□□□ 0.7
AP3D1O14617 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.43■□□□□ 0.7
AP3D1O14617 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
AP3D1O14617 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
AP3D1O14617 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
AP3D1O14617 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.43■□□□□ 0.7
AP3D1O14617 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.43■□□□□ 0.7
AP3D1O14617 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
AP3D1O14617 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
AP3D1O14617 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
AP3D1O14617 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.43■□□□□ 0.7
AP3D1O14617 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
AP3D1O14617 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
AP3D1O14617 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
AP3D1O14617 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
AP3D1O14617 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
AP3D1O14617 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
AP3D1O14617 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
AP3D1O14617 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms