Protein–RNA interactions for Protein: O00189

AP4M1, AP-4 complex subunit mu-1, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4M1O00189 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP4M1O00189 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP4M1O00189 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
AP4M1O00189 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
AP4M1O00189 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP4M1O00189 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.13■□□□□ 0.33
AP4M1O00189 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP4M1O00189 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP4M1O00189 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.13■□□□□ 0.33
AP4M1O00189 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
AP4M1O00189 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP4M1O00189 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.13■□□□□ 0.33
AP4M1O00189 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
AP4M1O00189 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
AP4M1O00189 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP4M1O00189 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
AP4M1O00189 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP4M1O00189 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
AP4M1O00189 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP4M1O00189 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
AP4M1O00189 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.12■□□□□ 0.33
AP4M1O00189 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP4M1O00189 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP4M1O00189 AC139530.1-201ENST00000575312 1977 ntBASIC17.12■□□□□ 0.33
AP4M1O00189 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP4M1O00189 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP4M1O00189 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC17.12■□□□□ 0.33
AP4M1O00189 JTB-203ENST00000368589 1216 ntTSL 2 BASIC17.12■□□□□ 0.33
AP4M1O00189 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
AP4M1O00189 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC17.12■□□□□ 0.33
AP4M1O00189 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.12■□□□□ 0.33
AP4M1O00189 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC17.12■□□□□ 0.33
AP4M1O00189 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
AP4M1O00189 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP4M1O00189 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
AP4M1O00189 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC17.12■□□□□ 0.33
AP4M1O00189 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.12■□□□□ 0.33
AP4M1O00189 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP4M1O00189 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.12■□□□□ 0.33
AP4M1O00189 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
AP4M1O00189 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP4M1O00189 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
AP4M1O00189 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
AP4M1O00189 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
AP4M1O00189 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP4M1O00189 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP4M1O00189 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.11■□□□□ 0.33
AP4M1O00189 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.11■□□□□ 0.33
AP4M1O00189 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP4M1O00189 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
AP4M1O00189 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP4M1O00189 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP4M1O00189 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP4M1O00189 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP4M1O00189 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.11■□□□□ 0.33
AP4M1O00189 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP4M1O00189 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.11■□□□□ 0.33
AP4M1O00189 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP4M1O00189 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC17.11■□□□□ 0.33
AP4M1O00189 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC17.11■□□□□ 0.33
AP4M1O00189 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP4M1O00189 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
AP4M1O00189 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.11■□□□□ 0.33
AP4M1O00189 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
AP4M1O00189 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
AP4M1O00189 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP4M1O00189 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP4M1O00189 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP4M1O00189 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP4M1O00189 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
AP4M1O00189 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP4M1O00189 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
AP4M1O00189 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
AP4M1O00189 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.1■□□□□ 0.33
AP4M1O00189 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP4M1O00189 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
AP4M1O00189 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.1■□□□□ 0.33
AP4M1O00189 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
AP4M1O00189 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP4M1O00189 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP4M1O00189 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP4M1O00189 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC17.1■□□□□ 0.33
AP4M1O00189 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP4M1O00189 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP4M1O00189 AC027612.3-201ENST00000413684 1047 ntBASIC17.1■□□□□ 0.33
AP4M1O00189 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP4M1O00189 AC079089.2-201ENST00000531211 1277 ntBASIC17.1■□□□□ 0.33
AP4M1O00189 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.1■□□□□ 0.33
AP4M1O00189 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.1■□□□□ 0.33
AP4M1O00189 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP4M1O00189 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
AP4M1O00189 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.1■□□□□ 0.33
AP4M1O00189 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
AP4M1O00189 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
AP4M1O00189 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
AP4M1O00189 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
AP4M1O00189 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP4M1O00189 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
AP4M1O00189 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.1■□□□□ 0.33
AP4M1O00189 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms