Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
CHKB-CPT1BH3BT56 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CHKB-CPT1BH3BT56 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
CHKB-CPT1BH3BT56 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
CHKB-CPT1BH3BT56 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC11.69□□□□□ -0.54
CHKB-CPT1BH3BT56 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
CHKB-CPT1BH3BT56 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CHKB-CPT1BH3BT56 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
CHKB-CPT1BH3BT56 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
CHKB-CPT1BH3BT56 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CHKB-CPT1BH3BT56 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC11.68□□□□□ -0.54
CHKB-CPT1BH3BT56 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CHKB-CPT1BH3BT56 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CHKB-CPT1BH3BT56 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
CHKB-CPT1BH3BT56 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CHKB-CPT1BH3BT56 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CHKB-CPT1BH3BT56 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
CHKB-CPT1BH3BT56 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC11.68□□□□□ -0.54
CHKB-CPT1BH3BT56 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
CHKB-CPT1BH3BT56 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
CHKB-CPT1BH3BT56 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CHKB-CPT1BH3BT56 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CHKB-CPT1BH3BT56 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CHKB-CPT1BH3BT56 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CHKB-CPT1BH3BT56 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
CHKB-CPT1BH3BT56 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CHKB-CPT1BH3BT56 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
CHKB-CPT1BH3BT56 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CHKB-CPT1BH3BT56 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
CHKB-CPT1BH3BT56 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
CHKB-CPT1BH3BT56 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
CHKB-CPT1BH3BT56 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CHKB-CPT1BH3BT56 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
CHKB-CPT1BH3BT56 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC11.68□□□□□ -0.54
CHKB-CPT1BH3BT56 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CHKB-CPT1BH3BT56 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
CHKB-CPT1BH3BT56 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
CHKB-CPT1BH3BT56 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CHKB-CPT1BH3BT56 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CHKB-CPT1BH3BT56 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC11.67□□□□□ -0.54
CHKB-CPT1BH3BT56 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
CHKB-CPT1BH3BT56 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC11.67□□□□□ -0.54
CHKB-CPT1BH3BT56 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
CHKB-CPT1BH3BT56 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CHKB-CPT1BH3BT56 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CHKB-CPT1BH3BT56 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
CHKB-CPT1BH3BT56 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC11.67□□□□□ -0.54
CHKB-CPT1BH3BT56 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CHKB-CPT1BH3BT56 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CHKB-CPT1BH3BT56 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC11.67□□□□□ -0.54
CHKB-CPT1BH3BT56 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CHKB-CPT1BH3BT56 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
CHKB-CPT1BH3BT56 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
CHKB-CPT1BH3BT56 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CHKB-CPT1BH3BT56 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CHKB-CPT1BH3BT56 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CHKB-CPT1BH3BT56 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CHKB-CPT1BH3BT56 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CHKB-CPT1BH3BT56 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC11.67□□□□□ -0.54
CHKB-CPT1BH3BT56 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CHKB-CPT1BH3BT56 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
CHKB-CPT1BH3BT56 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CHKB-CPT1BH3BT56 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC11.67□□□□□ -0.54
CHKB-CPT1BH3BT56 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CHKB-CPT1BH3BT56 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CHKB-CPT1BH3BT56 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
CHKB-CPT1BH3BT56 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC11.66□□□□□ -0.54
CHKB-CPT1BH3BT56 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CHKB-CPT1BH3BT56 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CHKB-CPT1BH3BT56 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
CHKB-CPT1BH3BT56 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
CHKB-CPT1BH3BT56 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC11.66□□□□□ -0.54
CHKB-CPT1BH3BT56 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CHKB-CPT1BH3BT56 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CHKB-CPT1BH3BT56 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CHKB-CPT1BH3BT56 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CHKB-CPT1BH3BT56 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CHKB-CPT1BH3BT56 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CHKB-CPT1BH3BT56 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CHKB-CPT1BH3BT56 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
CHKB-CPT1BH3BT56 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CHKB-CPT1BH3BT56 AC005082.1-201ENST00000413042 2259 ntBASIC11.66□□□□□ -0.54
CHKB-CPT1BH3BT56 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CHKB-CPT1BH3BT56 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CHKB-CPT1BH3BT56 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC11.66□□□□□ -0.54
CHKB-CPT1BH3BT56 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CHKB-CPT1BH3BT56 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC11.66□□□□□ -0.54
CHKB-CPT1BH3BT56 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
CHKB-CPT1BH3BT56 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CHKB-CPT1BH3BT56 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
CHKB-CPT1BH3BT56 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CHKB-CPT1BH3BT56 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
CHKB-CPT1BH3BT56 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
CHKB-CPT1BH3BT56 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
CHKB-CPT1BH3BT56 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CHKB-CPT1BH3BT56 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
CHKB-CPT1BH3BT56 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
CHKB-CPT1BH3BT56 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CHKB-CPT1BH3BT56 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CHKB-CPT1BH3BT56 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC11.65□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms