Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC16.51■□□□□ 0.23
RBFOX3A6NFN3 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RBFOX3A6NFN3 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
RBFOX3A6NFN3 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RBFOX3A6NFN3 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC16.51■□□□□ 0.23
RBFOX3A6NFN3 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.51■□□□□ 0.23
RBFOX3A6NFN3 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC16.51■□□□□ 0.23
RBFOX3A6NFN3 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RBFOX3A6NFN3 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC16.51■□□□□ 0.23
RBFOX3A6NFN3 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC16.51■□□□□ 0.23
RBFOX3A6NFN3 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RBFOX3A6NFN3 ERF-202ENST00000440177 2032 ntTSL 2 BASIC16.51■□□□□ 0.23
RBFOX3A6NFN3 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RBFOX3A6NFN3 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC16.51■□□□□ 0.23
RBFOX3A6NFN3 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC16.51■□□□□ 0.23
RBFOX3A6NFN3 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RBFOX3A6NFN3 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RBFOX3A6NFN3 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC16.51■□□□□ 0.23
RBFOX3A6NFN3 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
RBFOX3A6NFN3 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
RBFOX3A6NFN3 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RBFOX3A6NFN3 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RBFOX3A6NFN3 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RBFOX3A6NFN3 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RBFOX3A6NFN3 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RBFOX3A6NFN3 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RBFOX3A6NFN3 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC16.5■□□□□ 0.23
RBFOX3A6NFN3 TNXA-203ENST00000507684 2038 ntBASIC16.5■□□□□ 0.23
RBFOX3A6NFN3 AP000974.1-201ENST00000623909 2387 ntBASIC16.5■□□□□ 0.23
RBFOX3A6NFN3 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RBFOX3A6NFN3 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC16.5■□□□□ 0.23
RBFOX3A6NFN3 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RBFOX3A6NFN3 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RBFOX3A6NFN3 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RBFOX3A6NFN3 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC16.5■□□□□ 0.23
RBFOX3A6NFN3 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
RBFOX3A6NFN3 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RBFOX3A6NFN3 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RBFOX3A6NFN3 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
RBFOX3A6NFN3 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RBFOX3A6NFN3 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
RBFOX3A6NFN3 REST-206ENST00000612429 1376 ntTSL 5 BASIC16.5■□□□□ 0.23
RBFOX3A6NFN3 REST-207ENST00000616975 1370 ntTSL 5 BASIC16.5■□□□□ 0.23
RBFOX3A6NFN3 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RBFOX3A6NFN3 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC16.49■□□□□ 0.23
RBFOX3A6NFN3 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RBFOX3A6NFN3 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RBFOX3A6NFN3 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RBFOX3A6NFN3 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RBFOX3A6NFN3 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
RBFOX3A6NFN3 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RBFOX3A6NFN3 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
RBFOX3A6NFN3 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC16.49■□□□□ 0.23
RBFOX3A6NFN3 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC16.49■□□□□ 0.23
RBFOX3A6NFN3 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RBFOX3A6NFN3 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RBFOX3A6NFN3 ASB1-202ENST00000409297 878 ntTSL 5 BASIC16.49■□□□□ 0.23
RBFOX3A6NFN3 AC004408.2-201ENST00000623613 2777 ntBASIC16.49■□□□□ 0.23
RBFOX3A6NFN3 AF131216.4-201ENST00000638924 1588 ntBASIC16.49■□□□□ 0.23
RBFOX3A6NFN3 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.49■□□□□ 0.23
RBFOX3A6NFN3 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC16.49■□□□□ 0.23
RBFOX3A6NFN3 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC16.49■□□□□ 0.23
RBFOX3A6NFN3 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RBFOX3A6NFN3 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RBFOX3A6NFN3 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC16.49■□□□□ 0.23
RBFOX3A6NFN3 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RBFOX3A6NFN3 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RBFOX3A6NFN3 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RBFOX3A6NFN3 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RBFOX3A6NFN3 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RBFOX3A6NFN3 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RBFOX3A6NFN3 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC16.48■□□□□ 0.23
RBFOX3A6NFN3 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RBFOX3A6NFN3 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC16.48■□□□□ 0.23
RBFOX3A6NFN3 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
RBFOX3A6NFN3 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RBFOX3A6NFN3 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
RBFOX3A6NFN3 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RBFOX3A6NFN3 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.48■□□□□ 0.23
RBFOX3A6NFN3 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
RBFOX3A6NFN3 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC16.48■□□□□ 0.23
RBFOX3A6NFN3 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC16.48■□□□□ 0.23
RBFOX3A6NFN3 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
RBFOX3A6NFN3 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC16.48■□□□□ 0.23
RBFOX3A6NFN3 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC16.48■□□□□ 0.23
RBFOX3A6NFN3 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC16.48■□□□□ 0.23
RBFOX3A6NFN3 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
RBFOX3A6NFN3 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC16.48■□□□□ 0.23
RBFOX3A6NFN3 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.48■□□□□ 0.23
RBFOX3A6NFN3 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RBFOX3A6NFN3 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RBFOX3A6NFN3 AL162377.1-201ENST00000618844 1793 ntBASIC16.48■□□□□ 0.23
RBFOX3A6NFN3 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
RBFOX3A6NFN3 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RBFOX3A6NFN3 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
RBFOX3A6NFN3 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RBFOX3A6NFN3 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RBFOX3A6NFN3 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RBFOX3A6NFN3 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RBFOX3A6NFN3 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms