Protein–RNA interactions for Protein: A6NCI5

LINC00862, Putative transmembrane protein encoded by LINC00862, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00862A6NCI5 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LINC00862A6NCI5 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LINC00862A6NCI5 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LINC00862A6NCI5 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LINC00862A6NCI5 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LINC00862A6NCI5 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.06■□□□□ 0.32
LINC00862A6NCI5 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC17.06■□□□□ 0.32
LINC00862A6NCI5 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.06■□□□□ 0.32
LINC00862A6NCI5 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LINC00862A6NCI5 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.06■□□□□ 0.32
LINC00862A6NCI5 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LINC00862A6NCI5 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LINC00862A6NCI5 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
LINC00862A6NCI5 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LINC00862A6NCI5 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.05■□□□□ 0.32
LINC00862A6NCI5 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.05■□□□□ 0.32
LINC00862A6NCI5 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LINC00862A6NCI5 AC125437.2-201ENST00000625180 2167 ntBASIC17.05■□□□□ 0.32
LINC00862A6NCI5 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LINC00862A6NCI5 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.05■□□□□ 0.32
LINC00862A6NCI5 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LINC00862A6NCI5 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LINC00862A6NCI5 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
LINC00862A6NCI5 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LINC00862A6NCI5 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC17.05■□□□□ 0.32
LINC00862A6NCI5 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LINC00862A6NCI5 MED25-210ENST00000612854 801 ntTSL 5 BASIC17.05■□□□□ 0.32
LINC00862A6NCI5 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LINC00862A6NCI5 MED25-214ENST00000622402 642 ntTSL 5 BASIC17.05■□□□□ 0.32
LINC00862A6NCI5 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LINC00862A6NCI5 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC17.05■□□□□ 0.32
LINC00862A6NCI5 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC17.05■□□□□ 0.32
LINC00862A6NCI5 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.05■□□□□ 0.32
LINC00862A6NCI5 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
LINC00862A6NCI5 AL133373.2-201ENST00000623187 2828 ntBASIC17.05■□□□□ 0.32
LINC00862A6NCI5 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LINC00862A6NCI5 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.05■□□□□ 0.32
LINC00862A6NCI5 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LINC00862A6NCI5 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LINC00862A6NCI5 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
LINC00862A6NCI5 PLK5-205ENST00000642079 1969 ntBASIC17.04■□□□□ 0.32
LINC00862A6NCI5 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LINC00862A6NCI5 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LINC00862A6NCI5 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LINC00862A6NCI5 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
LINC00862A6NCI5 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
LINC00862A6NCI5 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LINC00862A6NCI5 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.04■□□□□ 0.32
LINC00862A6NCI5 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LINC00862A6NCI5 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.04■□□□□ 0.32
LINC00862A6NCI5 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LINC00862A6NCI5 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.04■□□□□ 0.32
LINC00862A6NCI5 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LINC00862A6NCI5 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LINC00862A6NCI5 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
LINC00862A6NCI5 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LINC00862A6NCI5 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINC00862A6NCI5 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINC00862A6NCI5 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINC00862A6NCI5 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
LINC00862A6NCI5 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINC00862A6NCI5 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.03■□□□□ 0.32
LINC00862A6NCI5 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINC00862A6NCI5 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.03■□□□□ 0.32
LINC00862A6NCI5 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
LINC00862A6NCI5 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
LINC00862A6NCI5 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINC00862A6NCI5 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINC00862A6NCI5 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINC00862A6NCI5 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINC00862A6NCI5 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINC00862A6NCI5 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LINC00862A6NCI5 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINC00862A6NCI5 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.03■□□□□ 0.32
LINC00862A6NCI5 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.03■□□□□ 0.32
LINC00862A6NCI5 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
LINC00862A6NCI5 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LINC00862A6NCI5 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LINC00862A6NCI5 USF2-207ENST00000595068 1612 ntTSL 5 BASIC17.03■□□□□ 0.32
LINC00862A6NCI5 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LINC00862A6NCI5 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
LINC00862A6NCI5 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LINC00862A6NCI5 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.02■□□□□ 0.32
LINC00862A6NCI5 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
LINC00862A6NCI5 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.02■□□□□ 0.32
LINC00862A6NCI5 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LINC00862A6NCI5 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LINC00862A6NCI5 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LINC00862A6NCI5 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.02■□□□□ 0.32
LINC00862A6NCI5 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LINC00862A6NCI5 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC17.02■□□□□ 0.32
LINC00862A6NCI5 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LINC00862A6NCI5 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.02■□□□□ 0.32
LINC00862A6NCI5 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.02■□□□□ 0.31
LINC00862A6NCI5 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LINC00862A6NCI5 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
LINC00862A6NCI5 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LINC00862A6NCI5 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LINC00862A6NCI5 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LINC00862A6NCI5 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms