Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC28.58■■■□□ 2.17
SBNO1A3KN83 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
SBNO1A3KN83 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
SBNO1A3KN83 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
SBNO1A3KN83 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
SBNO1A3KN83 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC28.58■■■□□ 2.17
SBNO1A3KN83 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
SBNO1A3KN83 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
SBNO1A3KN83 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
SBNO1A3KN83 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
SBNO1A3KN83 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC28.58■■■□□ 2.17
SBNO1A3KN83 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC28.58■■■□□ 2.17
SBNO1A3KN83 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC28.58■■■□□ 2.17
SBNO1A3KN83 SPIB-206ENST00000596074 847 ntTSL 2 BASIC28.58■■■□□ 2.17
SBNO1A3KN83 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
SBNO1A3KN83 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC28.57■■■□□ 2.16
SBNO1A3KN83 MIR1224-201ENST00000408193 85 ntBASIC28.57■■■□□ 2.16
SBNO1A3KN83 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
SBNO1A3KN83 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
SBNO1A3KN83 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
SBNO1A3KN83 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC28.57■■■□□ 2.16
SBNO1A3KN83 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
SBNO1A3KN83 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
SBNO1A3KN83 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC28.56■■■□□ 2.16
SBNO1A3KN83 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
SBNO1A3KN83 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
SBNO1A3KN83 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
SBNO1A3KN83 MDFI-202ENST00000373050 809 ntTSL 2 BASIC28.56■■■□□ 2.16
SBNO1A3KN83 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC28.56■■■□□ 2.16
SBNO1A3KN83 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
SBNO1A3KN83 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC28.56■■■□□ 2.16
SBNO1A3KN83 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC28.56■■■□□ 2.16
SBNO1A3KN83 RPS20-210ENST00000523936 899 ntTSL 2 BASIC28.56■■■□□ 2.16
SBNO1A3KN83 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
SBNO1A3KN83 SOX15-203ENST00000570788 1093 ntBASIC28.56■■■□□ 2.16
SBNO1A3KN83 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
SBNO1A3KN83 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
SBNO1A3KN83 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC28.56■■■□□ 2.16
SBNO1A3KN83 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
SBNO1A3KN83 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
SBNO1A3KN83 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
SBNO1A3KN83 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
SBNO1A3KN83 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC28.55■■■□□ 2.16
SBNO1A3KN83 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC28.55■■■□□ 2.16
SBNO1A3KN83 KLF2-202ENST00000592003 564 ntTSL 3 BASIC28.55■■■□□ 2.16
SBNO1A3KN83 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC28.55■■■□□ 2.16
SBNO1A3KN83 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC28.55■■■□□ 2.16
SBNO1A3KN83 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC28.55■■■□□ 2.16
SBNO1A3KN83 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC28.55■■■□□ 2.16
SBNO1A3KN83 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
SBNO1A3KN83 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
SBNO1A3KN83 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC28.54■■■□□ 2.16
SBNO1A3KN83 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
SBNO1A3KN83 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC28.54■■■□□ 2.16
SBNO1A3KN83 AC245052.3-201ENST00000450182 901 ntBASIC28.54■■■□□ 2.16
SBNO1A3KN83 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
SBNO1A3KN83 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC28.54■■■□□ 2.16
SBNO1A3KN83 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
SBNO1A3KN83 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
SBNO1A3KN83 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC28.54■■■□□ 2.16
SBNO1A3KN83 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC28.54■■■□□ 2.16
SBNO1A3KN83 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
SBNO1A3KN83 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
SBNO1A3KN83 AC003102.1-202ENST00000563394 1796 ntBASIC28.53■■■□□ 2.16
SBNO1A3KN83 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC28.53■■■□□ 2.16
SBNO1A3KN83 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC28.53■■■□□ 2.16
SBNO1A3KN83 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
SBNO1A3KN83 SAPCD2P1-201ENST00000395413 1184 ntBASIC28.53■■■□□ 2.16
SBNO1A3KN83 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC28.53■■■□□ 2.16
SBNO1A3KN83 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC28.53■■■□□ 2.16
SBNO1A3KN83 OR2A1-AS1-207ENST00000486094 819 ntBASIC28.53■■■□□ 2.16
SBNO1A3KN83 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
SBNO1A3KN83 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC28.53■■■□□ 2.16
SBNO1A3KN83 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC28.53■■■□□ 2.16
SBNO1A3KN83 LINC01023-201ENST00000606054 436 ntBASIC28.53■■■□□ 2.16
SBNO1A3KN83 REXO1L12P-201ENST00000622156 912 ntBASIC28.53■■■□□ 2.16
SBNO1A3KN83 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC28.53■■■□□ 2.16
SBNO1A3KN83 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC28.52■■■□□ 2.16
SBNO1A3KN83 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
SBNO1A3KN83 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
SBNO1A3KN83 AC012618.2-201ENST00000428058 849 ntBASIC28.52■■■□□ 2.16
SBNO1A3KN83 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC28.52■■■□□ 2.16
SBNO1A3KN83 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC28.52■■■□□ 2.16
SBNO1A3KN83 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
SBNO1A3KN83 GCK-205ENST00000437084 1385 ntTSL 5 BASIC28.52■■■□□ 2.16
SBNO1A3KN83 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC28.52■■■□□ 2.16
SBNO1A3KN83 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC28.52■■■□□ 2.16
SBNO1A3KN83 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC28.52■■■□□ 2.16
SBNO1A3KN83 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC28.52■■■□□ 2.16
SBNO1A3KN83 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC28.52■■■□□ 2.16
SBNO1A3KN83 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC28.51■■■□□ 2.16
SBNO1A3KN83 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC28.51■■■□□ 2.16
SBNO1A3KN83 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.16
SBNO1A3KN83 VMO1-204ENST00000441199 741 ntTSL 2 BASIC28.51■■■□□ 2.16
SBNO1A3KN83 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC28.51■■■□□ 2.16
SBNO1A3KN83 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC28.51■■■□□ 2.16
SBNO1A3KN83 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
SBNO1A3KN83 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC28.51■■■□□ 2.15
SBNO1A3KN83 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
SBNO1A3KN83 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms