Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SHISA3A0PJX4 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SHISA3A0PJX4 RNF146-205ENST00000477776 762 ntTSL 3 BASIC18.26■□□□□ 0.51
SHISA3A0PJX4 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SHISA3A0PJX4 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SHISA3A0PJX4 AP006587.3-201ENST00000525742 1516 ntBASIC18.26■□□□□ 0.51
SHISA3A0PJX4 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.26■□□□□ 0.51
SHISA3A0PJX4 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SHISA3A0PJX4 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.26■□□□□ 0.51
SHISA3A0PJX4 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.26■□□□□ 0.51
SHISA3A0PJX4 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SHISA3A0PJX4 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.26■□□□□ 0.51
SHISA3A0PJX4 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SHISA3A0PJX4 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SHISA3A0PJX4 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SHISA3A0PJX4 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
SHISA3A0PJX4 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
SHISA3A0PJX4 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
SHISA3A0PJX4 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SHISA3A0PJX4 AC087239.1-201ENST00000622671 572 ntBASIC18.25■□□□□ 0.51
SHISA3A0PJX4 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
SHISA3A0PJX4 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SHISA3A0PJX4 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.25■□□□□ 0.51
SHISA3A0PJX4 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SHISA3A0PJX4 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.25■□□□□ 0.51
SHISA3A0PJX4 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SHISA3A0PJX4 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SHISA3A0PJX4 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SHISA3A0PJX4 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.24■□□□□ 0.51
SHISA3A0PJX4 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SHISA3A0PJX4 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SHISA3A0PJX4 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SHISA3A0PJX4 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
SHISA3A0PJX4 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.24■□□□□ 0.51
SHISA3A0PJX4 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SHISA3A0PJX4 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SHISA3A0PJX4 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.24■□□□□ 0.51
SHISA3A0PJX4 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
SHISA3A0PJX4 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SHISA3A0PJX4 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
SHISA3A0PJX4 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SHISA3A0PJX4 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.24■□□□□ 0.51
SHISA3A0PJX4 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SHISA3A0PJX4 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SHISA3A0PJX4 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SHISA3A0PJX4 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
SHISA3A0PJX4 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
SHISA3A0PJX4 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
SHISA3A0PJX4 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SHISA3A0PJX4 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
SHISA3A0PJX4 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SHISA3A0PJX4 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.23■□□□□ 0.51
SHISA3A0PJX4 MIR4787-201ENST00000607364 84 ntBASIC18.23■□□□□ 0.51
SHISA3A0PJX4 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.23■□□□□ 0.51
SHISA3A0PJX4 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SHISA3A0PJX4 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SHISA3A0PJX4 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.23■□□□□ 0.51
SHISA3A0PJX4 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SHISA3A0PJX4 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SHISA3A0PJX4 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
SHISA3A0PJX4 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SHISA3A0PJX4 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SHISA3A0PJX4 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SHISA3A0PJX4 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SHISA3A0PJX4 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.22■□□□□ 0.51
SHISA3A0PJX4 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SHISA3A0PJX4 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SHISA3A0PJX4 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.22■□□□□ 0.51
SHISA3A0PJX4 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.22■□□□□ 0.51
SHISA3A0PJX4 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SHISA3A0PJX4 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SHISA3A0PJX4 MIR3181-201ENST00000578512 73 ntBASIC18.22■□□□□ 0.51
SHISA3A0PJX4 AC099791.2-201ENST00000605725 427 ntBASIC18.22■□□□□ 0.51
SHISA3A0PJX4 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
SHISA3A0PJX4 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.22■□□□□ 0.51
SHISA3A0PJX4 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SHISA3A0PJX4 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SHISA3A0PJX4 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SHISA3A0PJX4 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
SHISA3A0PJX4 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SHISA3A0PJX4 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
SHISA3A0PJX4 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.21■□□□□ 0.51
SHISA3A0PJX4 SMG8-203ENST00000578922 2178 ntBASIC18.21■□□□□ 0.51
SHISA3A0PJX4 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SHISA3A0PJX4 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.21■□□□□ 0.51
SHISA3A0PJX4 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SHISA3A0PJX4 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SHISA3A0PJX4 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SHISA3A0PJX4 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
SHISA3A0PJX4 KRT125P-201ENST00000546827 989 ntBASIC18.21■□□□□ 0.51
SHISA3A0PJX4 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.21■□□□□ 0.51
SHISA3A0PJX4 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SHISA3A0PJX4 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.21■□□□□ 0.51
SHISA3A0PJX4 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SHISA3A0PJX4 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SHISA3A0PJX4 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SHISA3A0PJX4 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SHISA3A0PJX4 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
SHISA3A0PJX4 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.21■□□□□ 0.51
SHISA3A0PJX4 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms