Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TCRBV4S1A1TA0A5B7 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC16.78■□□□□ 0.28
TCRBV4S1A1TA0A5B7 KRT18P61-201ENST00000585825 1298 ntBASIC16.78■□□□□ 0.28
TCRBV4S1A1TA0A5B7 AC080038.1-201ENST00000611274 1154 ntBASIC16.78■□□□□ 0.28
TCRBV4S1A1TA0A5B7 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TCRBV4S1A1TA0A5B7 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC16.78■□□□□ 0.28
TCRBV4S1A1TA0A5B7 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TCRBV4S1A1TA0A5B7 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC16.78■□□□□ 0.28
TCRBV4S1A1TA0A5B7 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TCRBV4S1A1TA0A5B7 AC005224.4-201ENST00000583262 1652 ntBASIC16.78■□□□□ 0.28
TCRBV4S1A1TA0A5B7 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TCRBV4S1A1TA0A5B7 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC16.77■□□□□ 0.28
TCRBV4S1A1TA0A5B7 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC16.77■□□□□ 0.28
TCRBV4S1A1TA0A5B7 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TCRBV4S1A1TA0A5B7 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
TCRBV4S1A1TA0A5B7 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TCRBV4S1A1TA0A5B7 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TCRBV4S1A1TA0A5B7 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TCRBV4S1A1TA0A5B7 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
TCRBV4S1A1TA0A5B7 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC16.77■□□□□ 0.28
TCRBV4S1A1TA0A5B7 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC16.77■□□□□ 0.28
TCRBV4S1A1TA0A5B7 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC16.77■□□□□ 0.28
TCRBV4S1A1TA0A5B7 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC16.77■□□□□ 0.28
TCRBV4S1A1TA0A5B7 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC16.77■□□□□ 0.28
TCRBV4S1A1TA0A5B7 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC16.77■□□□□ 0.28
TCRBV4S1A1TA0A5B7 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TCRBV4S1A1TA0A5B7 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TCRBV4S1A1TA0A5B7 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
TCRBV4S1A1TA0A5B7 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TCRBV4S1A1TA0A5B7 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TCRBV4S1A1TA0A5B7 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TCRBV4S1A1TA0A5B7 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
TCRBV4S1A1TA0A5B7 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC16.77■□□□□ 0.27
TCRBV4S1A1TA0A5B7 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TCRBV4S1A1TA0A5B7 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC16.77■□□□□ 0.27
TCRBV4S1A1TA0A5B7 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
TCRBV4S1A1TA0A5B7 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TCRBV4S1A1TA0A5B7 HSCB-202ENST00000398941 955 ntTSL 2 BASIC16.76■□□□□ 0.27
TCRBV4S1A1TA0A5B7 AC006015.1-201ENST00000429970 570 ntBASIC16.76■□□□□ 0.27
TCRBV4S1A1TA0A5B7 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC16.76■□□□□ 0.27
TCRBV4S1A1TA0A5B7 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TCRBV4S1A1TA0A5B7 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TCRBV4S1A1TA0A5B7 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TCRBV4S1A1TA0A5B7 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC16.76■□□□□ 0.27
TCRBV4S1A1TA0A5B7 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TCRBV4S1A1TA0A5B7 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
TCRBV4S1A1TA0A5B7 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC16.76■□□□□ 0.27
TCRBV4S1A1TA0A5B7 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC16.76■□□□□ 0.27
TCRBV4S1A1TA0A5B7 GAS2L1P2-201ENST00000436355 1356 ntBASIC16.76■□□□□ 0.27
TCRBV4S1A1TA0A5B7 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TCRBV4S1A1TA0A5B7 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TCRBV4S1A1TA0A5B7 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TCRBV4S1A1TA0A5B7 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
TCRBV4S1A1TA0A5B7 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TCRBV4S1A1TA0A5B7 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
TCRBV4S1A1TA0A5B7 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TCRBV4S1A1TA0A5B7 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TCRBV4S1A1TA0A5B7 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC16.75■□□□□ 0.27
TCRBV4S1A1TA0A5B7 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TCRBV4S1A1TA0A5B7 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TCRBV4S1A1TA0A5B7 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC16.75■□□□□ 0.27
TCRBV4S1A1TA0A5B7 BID-214ENST00000617586 542 ntTSL 5 BASIC16.75■□□□□ 0.27
TCRBV4S1A1TA0A5B7 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TCRBV4S1A1TA0A5B7 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TCRBV4S1A1TA0A5B7 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TCRBV4S1A1TA0A5B7 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC16.75■□□□□ 0.27
TCRBV4S1A1TA0A5B7 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TCRBV4S1A1TA0A5B7 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
TCRBV4S1A1TA0A5B7 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TCRBV4S1A1TA0A5B7 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TCRBV4S1A1TA0A5B7 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TCRBV4S1A1TA0A5B7 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TCRBV4S1A1TA0A5B7 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TCRBV4S1A1TA0A5B7 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC16.74■□□□□ 0.27
TCRBV4S1A1TA0A5B7 AC026471.6-201ENST00000622954 1905 ntBASIC16.74■□□□□ 0.27
TCRBV4S1A1TA0A5B7 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC16.74■□□□□ 0.27
TCRBV4S1A1TA0A5B7 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC16.74■□□□□ 0.27
TCRBV4S1A1TA0A5B7 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TCRBV4S1A1TA0A5B7 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TCRBV4S1A1TA0A5B7 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TCRBV4S1A1TA0A5B7 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TCRBV4S1A1TA0A5B7 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TCRBV4S1A1TA0A5B7 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TCRBV4S1A1TA0A5B7 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC16.74■□□□□ 0.27
TCRBV4S1A1TA0A5B7 KRT18P11-201ENST00000435214 1283 ntBASIC16.74■□□□□ 0.27
TCRBV4S1A1TA0A5B7 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TCRBV4S1A1TA0A5B7 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TCRBV4S1A1TA0A5B7 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC16.74■□□□□ 0.27
TCRBV4S1A1TA0A5B7 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC16.74■□□□□ 0.27
TCRBV4S1A1TA0A5B7 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TCRBV4S1A1TA0A5B7 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TCRBV4S1A1TA0A5B7 AF106564.1-201ENST00000607058 2553 ntBASIC16.74■□□□□ 0.27
TCRBV4S1A1TA0A5B7 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TCRBV4S1A1TA0A5B7 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TCRBV4S1A1TA0A5B7 KRT87P-202ENST00000534226 1464 ntBASIC16.73■□□□□ 0.27
TCRBV4S1A1TA0A5B7 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TCRBV4S1A1TA0A5B7 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TCRBV4S1A1TA0A5B7 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TCRBV4S1A1TA0A5B7 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TCRBV4S1A1TA0A5B7 AP004607.7-201ENST00000527152 1677 ntBASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms