Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV21A0A0B4J279 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV21A0A0B4J279 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV21A0A0B4J279 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV21A0A0B4J279 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV21A0A0B4J279 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV21A0A0B4J279 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV21A0A0B4J279 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV21A0A0B4J279 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC15.51■□□□□ 0.07
TRAV21A0A0B4J279 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV21A0A0B4J279 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV21A0A0B4J279 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC15.51■□□□□ 0.07
TRAV21A0A0B4J279 PTMA-205ENST00000410064 814 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV21A0A0B4J279 BX842568.3-201ENST00000418104 571 ntBASIC15.51■□□□□ 0.07
TRAV21A0A0B4J279 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV21A0A0B4J279 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV21A0A0B4J279 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV21A0A0B4J279 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC15.51■□□□□ 0.07
TRAV21A0A0B4J279 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TRAV21A0A0B4J279 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV21A0A0B4J279 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TRAV21A0A0B4J279 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TRAV21A0A0B4J279 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV21A0A0B4J279 FEM1AP1-201ENST00000431297 1995 ntBASIC15.51■□□□□ 0.07
TRAV21A0A0B4J279 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV21A0A0B4J279 AC006128.1-201ENST00000624704 1661 ntBASIC15.51■□□□□ 0.07
TRAV21A0A0B4J279 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV21A0A0B4J279 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV21A0A0B4J279 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV21A0A0B4J279 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC15.5■□□□□ 0.07
TRAV21A0A0B4J279 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC15.5■□□□□ 0.07
TRAV21A0A0B4J279 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV21A0A0B4J279 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV21A0A0B4J279 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV21A0A0B4J279 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV21A0A0B4J279 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
TRAV21A0A0B4J279 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC15.5■□□□□ 0.07
TRAV21A0A0B4J279 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
TRAV21A0A0B4J279 SMUG1P1-201ENST00000590640 811 ntBASIC15.5■□□□□ 0.07
TRAV21A0A0B4J279 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV21A0A0B4J279 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC15.5■□□□□ 0.07
TRAV21A0A0B4J279 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TRAV21A0A0B4J279 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TRAV21A0A0B4J279 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC15.5■□□□□ 0.07
TRAV21A0A0B4J279 PALM-207ENST00000590161 2137 ntTSL 4 BASIC15.5■□□□□ 0.07
TRAV21A0A0B4J279 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV21A0A0B4J279 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV21A0A0B4J279 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV21A0A0B4J279 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
TRAV21A0A0B4J279 LINC01006-201ENST00000333319 2292 ntBASIC15.5■□□□□ 0.07
TRAV21A0A0B4J279 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV21A0A0B4J279 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV21A0A0B4J279 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV21A0A0B4J279 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV21A0A0B4J279 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
TRAV21A0A0B4J279 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC15.49■□□□□ 0.07
TRAV21A0A0B4J279 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV21A0A0B4J279 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC15.49■□□□□ 0.07
TRAV21A0A0B4J279 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
TRAV21A0A0B4J279 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV21A0A0B4J279 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV21A0A0B4J279 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV21A0A0B4J279 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV21A0A0B4J279 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV21A0A0B4J279 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV21A0A0B4J279 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC15.49■□□□□ 0.07
TRAV21A0A0B4J279 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC15.49■□□□□ 0.07
TRAV21A0A0B4J279 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC15.49■□□□□ 0.07
TRAV21A0A0B4J279 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
TRAV21A0A0B4J279 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV21A0A0B4J279 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
TRAV21A0A0B4J279 AC009237.3-201ENST00000393279 1427 ntBASIC15.49■□□□□ 0.07
TRAV21A0A0B4J279 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV21A0A0B4J279 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC15.49■□□□□ 0.07
TRAV21A0A0B4J279 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV21A0A0B4J279 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
TRAV21A0A0B4J279 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC15.49■□□□□ 0.07
TRAV21A0A0B4J279 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV21A0A0B4J279 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV21A0A0B4J279 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV21A0A0B4J279 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
TRAV21A0A0B4J279 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV21A0A0B4J279 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV21A0A0B4J279 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV21A0A0B4J279 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
TRAV21A0A0B4J279 AC131281.2-201ENST00000520478 145 ntBASIC15.48■□□□□ 0.07
TRAV21A0A0B4J279 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV21A0A0B4J279 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
TRAV21A0A0B4J279 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV21A0A0B4J279 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
TRAV21A0A0B4J279 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV21A0A0B4J279 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV21A0A0B4J279 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV21A0A0B4J279 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV21A0A0B4J279 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV21A0A0B4J279 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV21A0A0B4J279 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV21A0A0B4J279 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TRAV21A0A0B4J279 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC15.47■□□□□ 0.07
TRAV21A0A0B4J279 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms