Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAV8-4A0A0B4J246 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV8-4A0A0B4J246 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV8-4A0A0B4J246 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV8-4A0A0B4J246 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV8-4A0A0B4J246 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TRAV8-4A0A0B4J246 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV8-4A0A0B4J246 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV8-4A0A0B4J246 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV8-4A0A0B4J246 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV8-4A0A0B4J246 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV8-4A0A0B4J246 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
TRAV8-4A0A0B4J246 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV8-4A0A0B4J246 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TRAV8-4A0A0B4J246 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV8-4A0A0B4J246 AL034346.1-201ENST00000568244 1277 ntBASIC14.57□□□□□ -0.08
TRAV8-4A0A0B4J246 AC131212.1-201ENST00000613771 668 ntBASIC14.57□□□□□ -0.08
TRAV8-4A0A0B4J246 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC14.57□□□□□ -0.08
TRAV8-4A0A0B4J246 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV8-4A0A0B4J246 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV8-4A0A0B4J246 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
TRAV8-4A0A0B4J246 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV8-4A0A0B4J246 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV8-4A0A0B4J246 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV8-4A0A0B4J246 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV8-4A0A0B4J246 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAV8-4A0A0B4J246 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV8-4A0A0B4J246 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
TRAV8-4A0A0B4J246 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV8-4A0A0B4J246 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV8-4A0A0B4J246 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV8-4A0A0B4J246 OXCT2P1-201ENST00000447263 1535 ntBASIC14.56□□□□□ -0.08
TRAV8-4A0A0B4J246 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC14.56□□□□□ -0.08
TRAV8-4A0A0B4J246 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TRAV8-4A0A0B4J246 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAV8-4A0A0B4J246 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV8-4A0A0B4J246 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
TRAV8-4A0A0B4J246 FBXW4P1-201ENST00000426721 2239 ntBASIC14.56□□□□□ -0.08
TRAV8-4A0A0B4J246 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV8-4A0A0B4J246 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC14.56□□□□□ -0.08
TRAV8-4A0A0B4J246 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV8-4A0A0B4J246 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV8-4A0A0B4J246 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAV8-4A0A0B4J246 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV8-4A0A0B4J246 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV8-4A0A0B4J246 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV8-4A0A0B4J246 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV8-4A0A0B4J246 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAV8-4A0A0B4J246 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV8-4A0A0B4J246 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV8-4A0A0B4J246 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV8-4A0A0B4J246 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV8-4A0A0B4J246 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV8-4A0A0B4J246 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC14.55□□□□□ -0.08
TRAV8-4A0A0B4J246 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC14.55□□□□□ -0.08
TRAV8-4A0A0B4J246 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV8-4A0A0B4J246 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC14.55□□□□□ -0.08
TRAV8-4A0A0B4J246 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
TRAV8-4A0A0B4J246 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
TRAV8-4A0A0B4J246 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC14.55□□□□□ -0.08
TRAV8-4A0A0B4J246 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV8-4A0A0B4J246 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
TRAV8-4A0A0B4J246 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
TRAV8-4A0A0B4J246 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV8-4A0A0B4J246 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
TRAV8-4A0A0B4J246 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC14.55□□□□□ -0.08
TRAV8-4A0A0B4J246 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC14.55□□□□□ -0.08
TRAV8-4A0A0B4J246 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV8-4A0A0B4J246 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC14.55□□□□□ -0.08
TRAV8-4A0A0B4J246 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC14.55□□□□□ -0.08
TRAV8-4A0A0B4J246 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC14.55□□□□□ -0.08
TRAV8-4A0A0B4J246 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
TRAV8-4A0A0B4J246 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV8-4A0A0B4J246 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV8-4A0A0B4J246 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
TRAV8-4A0A0B4J246 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
TRAV8-4A0A0B4J246 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV8-4A0A0B4J246 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV8-4A0A0B4J246 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TRAV8-4A0A0B4J246 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV8-4A0A0B4J246 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV8-4A0A0B4J246 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAV8-4A0A0B4J246 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV8-4A0A0B4J246 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAV8-4A0A0B4J246 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC14.54□□□□□ -0.08
TRAV8-4A0A0B4J246 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV8-4A0A0B4J246 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV8-4A0A0B4J246 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV8-4A0A0B4J246 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAV8-4A0A0B4J246 PTMA-205ENST00000410064 814 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAV8-4A0A0B4J246 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAV8-4A0A0B4J246 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV8-4A0A0B4J246 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV8-4A0A0B4J246 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV8-4A0A0B4J246 AC008406.3-201ENST00000620001 1374 ntBASIC14.54□□□□□ -0.08
TRAV8-4A0A0B4J246 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV8-4A0A0B4J246 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV8-4A0A0B4J246 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV8-4A0A0B4J246 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAV8-4A0A0B4J246 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms