Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 DAPP1-203ENST00000512369 1440 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
LMO3Q8TAP4 CHODL-202ENST00000338326 1974 ntTSL 5 BASIC10.94□□□□□ -0.66
LMO3Q8TAP4 LOXHD1-210ENST00000536736 6848 ntAPPRIS P5 TSL 5 BASIC10.94□□□□□ -0.66
LMO3Q8TAP4 RNF141-201ENST00000265981 4074 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LMO3Q8TAP4 RFFL-212ENST00000584655 4039 ntTSL 2 BASIC10.94□□□□□ -0.66
LMO3Q8TAP4 C11orf57-203ENST00000420986 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LMO3Q8TAP4 EMP3-201ENST00000270221 876 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LMO3Q8TAP4 OR2AG1-201ENST00000307401 998 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
LMO3Q8TAP4 PBDC1-202ENST00000373358 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LMO3Q8TAP4 ZNF267-202ENST00000394846 680 ntTSL 2 BASIC10.94□□□□□ -0.66
LMO3Q8TAP4 OR51H2P-201ENST00000413036 906 ntBASIC10.94□□□□□ -0.66
LMO3Q8TAP4 AC245060.3-201ENST00000432623 1242 ntBASIC10.94□□□□□ -0.66
LMO3Q8TAP4 AL672032.1-201ENST00000440614 938 ntTSL 3 BASIC10.94□□□□□ -0.66
LMO3Q8TAP4 GUSBP2-203ENST00000492832 801 ntBASIC10.94□□□□□ -0.66
LMO3Q8TAP4 AC097535.2-201ENST00000507715 142 ntBASIC10.94□□□□□ -0.66
LMO3Q8TAP4 AC026117.1-201ENST00000509658 883 ntBASIC10.94□□□□□ -0.66
LMO3Q8TAP4 AC079226.1-201ENST00000513255 444 ntTSL 3 BASIC10.94□□□□□ -0.66
LMO3Q8TAP4 AC008434.1-201ENST00000514201 549 ntTSL 3 BASIC10.94□□□□□ -0.66
LMO3Q8TAP4 HNRNPH1P3-201ENST00000515565 1225 ntBASIC10.94□□□□□ -0.66
LMO3Q8TAP4 RNA5SP444-201ENST00000516844 106 ntBASIC10.94□□□□□ -0.66
LMO3Q8TAP4 LETM2-213ENST00000527710 1261 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LMO3Q8TAP4 AC079360.1-201ENST00000543848 434 ntTSL 3 BASIC10.94□□□□□ -0.66
LMO3Q8TAP4 AC004585.1-201ENST00000578280 1014 ntTSL 5 BASIC10.94□□□□□ -0.66
LMO3Q8TAP4 AC093484.3-201ENST00000578296 449 ntBASIC10.94□□□□□ -0.66
LMO3Q8TAP4 AC145207.7-201ENST00000580125 958 ntBASIC10.94□□□□□ -0.66
LMO3Q8TAP4 EMP3-206ENST00000597279 683 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
LMO3Q8TAP4 AC008554.1-201ENST00000598131 811 ntTSL 3 BASIC10.94□□□□□ -0.66
LMO3Q8TAP4 AC006547.1-207ENST00000601746 930 ntTSL 5 BASIC10.94□□□□□ -0.66
LMO3Q8TAP4 GAGE1-203ENST00000610680 564 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LMO3Q8TAP4 HNRNPCL3-201ENST00000617807 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LMO3Q8TAP4 AC245369.4-201ENST00000632209 353 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
LMO3Q8TAP4 NBDY-204ENST00000637096 896 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
LMO3Q8TAP4 PDXK-209ENST00000467908 7194 ntTSL 3 BASIC10.94□□□□□ -0.66
LMO3Q8TAP4 MRPL45-203ENST00000613675 1705 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LMO3Q8TAP4 TSPYL4-201ENST00000420283 4180 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
LMO3Q8TAP4 ARHGEF3-202ENST00000338458 3639 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LMO3Q8TAP4 AC083836.1-201ENST00000519366 2125 ntTSL 5 BASIC10.94□□□□□ -0.66
LMO3Q8TAP4 JKAMP-203ENST00000425728 1636 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LMO3Q8TAP4 GANAB-201ENST00000346178 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
LMO3Q8TAP4 MEIS2-211ENST00000559085 2538 ntTSL 2 BASIC10.94□□□□□ -0.66
LMO3Q8TAP4 MARCH10-203ENST00000544856 3338 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
LMO3Q8TAP4 SYT17-202ENST00000562034 5092 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LMO3Q8TAP4 GPRASP2-201ENST00000332262 3720 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LMO3Q8TAP4 CELSR3-201ENST00000164024 11956 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LMO3Q8TAP4 UPF3B-201ENST00000276201 2378 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LMO3Q8TAP4 KCNE1-204ENST00000399289 3154 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LMO3Q8TAP4 FER1L5-205ENST00000623246 6513 ntTSL 5 BASIC10.93□□□□□ -0.66
LMO3Q8TAP4 CYP17A1-201ENST00000369887 1870 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
LMO3Q8TAP4 SCARA3-201ENST00000301904 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LMO3Q8TAP4 ZNF860-201ENST00000360311 3098 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
LMO3Q8TAP4 AC005921.3-201ENST00000623774 2151 ntBASIC10.93□□□□□ -0.66
LMO3Q8TAP4 PAQR5-202ENST00000395407 5337 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LMO3Q8TAP4 TSEN2P1-201ENST00000513552 1387 ntBASIC10.93□□□□□ -0.66
LMO3Q8TAP4 AL592490.1-201ENST00000409186 6347 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LMO3Q8TAP4 AC006946.2-201ENST00000608373 2855 ntBASIC10.93□□□□□ -0.66
LMO3Q8TAP4 GAD1-202ENST00000358196 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LMO3Q8TAP4 AP3S2-201ENST00000336418 5891 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LMO3Q8TAP4 HIF1A-202ENST00000337138 3919 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
LMO3Q8TAP4 RYR1-202ENST00000359596 15117 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
LMO3Q8TAP4 USP17L10-202ENST00000421288 1677 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
LMO3Q8TAP4 LINC01964-201ENST00000567718 3137 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LMO3Q8TAP4 LINC00968-201ENST00000499425 2366 ntTSL 2 BASIC10.93□□□□□ -0.66
LMO3Q8TAP4 RPS13-201ENST00000228140 491 ntTSL 2 BASIC10.93□□□□□ -0.66
LMO3Q8TAP4 COA1-202ENST00000310564 1085 ntAPPRIS P3 TSL 2 BASIC10.93□□□□□ -0.66
LMO3Q8TAP4 HFE-206ENST00000353147 809 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LMO3Q8TAP4 C1orf61-204ENST00000368243 879 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
LMO3Q8TAP4 MIR636-201ENST00000384825 99 ntBASIC10.93□□□□□ -0.66
LMO3Q8TAP4 TRAV8-2-201ENST00000390434 566 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
LMO3Q8TAP4 RN7SKP150-201ENST00000410516 321 ntBASIC10.93□□□□□ -0.66
LMO3Q8TAP4 AC119677.1-201ENST00000414199 471 ntTSL 3 BASIC10.93□□□□□ -0.66
LMO3Q8TAP4 H2AFZP1-201ENST00000416034 395 ntBASIC10.93□□□□□ -0.66
LMO3Q8TAP4 LINC00694-201ENST00000416124 729 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
LMO3Q8TAP4 AL831784.1-201ENST00000427302 373 ntTSL 2 BASIC10.93□□□□□ -0.66
LMO3Q8TAP4 AL157395.1-201ENST00000427630 438 ntTSL 3 BASIC10.93□□□□□ -0.66
LMO3Q8TAP4 AL133553.1-201ENST00000428391 353 ntTSL 3 BASIC10.93□□□□□ -0.66
LMO3Q8TAP4 AL049564.1-201ENST00000449099 825 ntBASIC10.93□□□□□ -0.66
LMO3Q8TAP4 GAPDHP74-201ENST00000449411 625 ntBASIC10.93□□□□□ -0.66
LMO3Q8TAP4 HNRNPA1P57-202ENST00000452488 958 ntBASIC10.93□□□□□ -0.66
LMO3Q8TAP4 AC067930.1-201ENST00000517300 291 ntBASIC10.93□□□□□ -0.66
LMO3Q8TAP4 LINC01605-202ENST00000519738 733 ntTSL 5 BASIC10.93□□□□□ -0.66
LMO3Q8TAP4 CA3-AS1-202ENST00000521761 591 ntTSL 4 BASIC10.93□□□□□ -0.66
LMO3Q8TAP4 BTNL2-205ENST00000544175 845 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LMO3Q8TAP4 AC073913.1-201ENST00000544240 912 ntBASIC10.93□□□□□ -0.66
LMO3Q8TAP4 AC025575.2-201ENST00000549357 565 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LMO3Q8TAP4 AC009660.1-201ENST00000559052 748 ntBASIC10.93□□□□□ -0.66
LMO3Q8TAP4 CHP1-204ENST00000560397 568 ntTSL 3 BASIC10.93□□□□□ -0.66
LMO3Q8TAP4 FKBP1AP2-201ENST00000560953 283 ntBASIC10.93□□□□□ -0.66
LMO3Q8TAP4 AC008731.1-201ENST00000568895 579 ntTSL 3 BASIC10.93□□□□□ -0.66
LMO3Q8TAP4 AC132812.2-201ENST00000604003 229 ntBASIC10.93□□□□□ -0.66
LMO3Q8TAP4 AC005154.1-207ENST00000625565 597 ntTSL 5 BASIC10.93□□□□□ -0.66
LMO3Q8TAP4 IK-201ENST00000417647 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LMO3Q8TAP4 BLZF1-201ENST00000329281 2300 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LMO3Q8TAP4 FBXO8-201ENST00000393674 2577 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LMO3Q8TAP4 SERPINB3-202ENST00000332821 1541 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LMO3Q8TAP4 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LMO3Q8TAP4 RPL23-206ENST00000479035 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LMO3Q8TAP4 RABGGTB-201ENST00000319942 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LMO3Q8TAP4 LCLAT1-202ENST00000319406 2774 ntTSL 2 BASIC10.93□□□□□ -0.66
LMO3Q8TAP4 FOXN1-201ENST00000226247 3436 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LMO3Q8TAP4 KDM2A-212ENST00000530342 3651 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms