Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.02■□□□□ 0.8
AP4B1Q9Y6B7 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
AP4B1Q9Y6B7 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
AP4B1Q9Y6B7 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.02■□□□□ 0.8
AP4B1Q9Y6B7 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
AP4B1Q9Y6B7 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.02■□□□□ 0.8
AP4B1Q9Y6B7 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
AP4B1Q9Y6B7 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.02■□□□□ 0.8
AP4B1Q9Y6B7 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.02■□□□□ 0.8
AP4B1Q9Y6B7 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.02■□□□□ 0.8
AP4B1Q9Y6B7 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.02■□□□□ 0.8
AP4B1Q9Y6B7 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.02■□□□□ 0.8
AP4B1Q9Y6B7 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
AP4B1Q9Y6B7 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
AP4B1Q9Y6B7 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.02■□□□□ 0.79
AP4B1Q9Y6B7 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
AP4B1Q9Y6B7 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.01■□□□□ 0.79
AP4B1Q9Y6B7 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.01■□□□□ 0.79
AP4B1Q9Y6B7 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.01■□□□□ 0.79
AP4B1Q9Y6B7 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.01■□□□□ 0.79
AP4B1Q9Y6B7 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
AP4B1Q9Y6B7 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
AP4B1Q9Y6B7 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
AP4B1Q9Y6B7 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
AP4B1Q9Y6B7 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
AP4B1Q9Y6B7 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.01■□□□□ 0.79
AP4B1Q9Y6B7 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.01■□□□□ 0.79
AP4B1Q9Y6B7 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.01■□□□□ 0.79
AP4B1Q9Y6B7 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
AP4B1Q9Y6B7 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
AP4B1Q9Y6B7 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
AP4B1Q9Y6B7 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
AP4B1Q9Y6B7 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
AP4B1Q9Y6B7 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
AP4B1Q9Y6B7 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
AP4B1Q9Y6B7 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
AP4B1Q9Y6B7 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20■□□□□ 0.79
AP4B1Q9Y6B7 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20■□□□□ 0.79
AP4B1Q9Y6B7 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20■□□□□ 0.79
AP4B1Q9Y6B7 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
AP4B1Q9Y6B7 GRAMD4P4-201ENST00000613563 1115 ntBASIC20■□□□□ 0.79
AP4B1Q9Y6B7 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
AP4B1Q9Y6B7 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
AP4B1Q9Y6B7 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
AP4B1Q9Y6B7 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
AP4B1Q9Y6B7 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
AP4B1Q9Y6B7 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20■□□□□ 0.79
AP4B1Q9Y6B7 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
AP4B1Q9Y6B7 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
AP4B1Q9Y6B7 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
AP4B1Q9Y6B7 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
AP4B1Q9Y6B7 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
AP4B1Q9Y6B7 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
AP4B1Q9Y6B7 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
AP4B1Q9Y6B7 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.99■□□□□ 0.79
AP4B1Q9Y6B7 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
AP4B1Q9Y6B7 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
AP4B1Q9Y6B7 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
AP4B1Q9Y6B7 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
AP4B1Q9Y6B7 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
AP4B1Q9Y6B7 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.99■□□□□ 0.79
AP4B1Q9Y6B7 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.99■□□□□ 0.79
AP4B1Q9Y6B7 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.99■□□□□ 0.79
AP4B1Q9Y6B7 AL031432.3-201ENST00000607698 485 ntBASIC19.99■□□□□ 0.79
AP4B1Q9Y6B7 CA15P2-201ENST00000611168 834 ntBASIC19.99■□□□□ 0.79
AP4B1Q9Y6B7 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.99■□□□□ 0.79
AP4B1Q9Y6B7 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.99■□□□□ 0.79
AP4B1Q9Y6B7 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
AP4B1Q9Y6B7 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.99■□□□□ 0.79
AP4B1Q9Y6B7 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
AP4B1Q9Y6B7 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
AP4B1Q9Y6B7 AC087289.5-201ENST00000586076 3175 ntBASIC19.99■□□□□ 0.79
AP4B1Q9Y6B7 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
AP4B1Q9Y6B7 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
AP4B1Q9Y6B7 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
AP4B1Q9Y6B7 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
AP4B1Q9Y6B7 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
AP4B1Q9Y6B7 GABARAPL3-202ENST00000624044 1851 ntBASIC19.99■□□□□ 0.79
AP4B1Q9Y6B7 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
AP4B1Q9Y6B7 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
AP4B1Q9Y6B7 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
AP4B1Q9Y6B7 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
AP4B1Q9Y6B7 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
AP4B1Q9Y6B7 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
AP4B1Q9Y6B7 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.98■□□□□ 0.79
AP4B1Q9Y6B7 AL020996.1-203ENST00000536896 2307 ntBASIC19.98■□□□□ 0.79
AP4B1Q9Y6B7 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.98■□□□□ 0.79
AP4B1Q9Y6B7 PCDHAC2-203ENST00000615316 3011 ntBASIC19.98■□□□□ 0.79
AP4B1Q9Y6B7 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
AP4B1Q9Y6B7 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
AP4B1Q9Y6B7 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.98■□□□□ 0.79
AP4B1Q9Y6B7 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
AP4B1Q9Y6B7 SUDS3P1-201ENST00000505831 966 ntBASIC19.98■□□□□ 0.79
AP4B1Q9Y6B7 AC142381.2-201ENST00000566120 298 ntBASIC19.98■□□□□ 0.79
AP4B1Q9Y6B7 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
AP4B1Q9Y6B7 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
AP4B1Q9Y6B7 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
AP4B1Q9Y6B7 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
AP4B1Q9Y6B7 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
AP4B1Q9Y6B7 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms